| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5062 |
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| Symbol | |
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| ID | 1186747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5765947 |
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| End bp | 5766585 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637396382 |
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| Product | class II aldolase/adducin domain protein |
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| Protein accession | NP_794794 |
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| Protein GI | 28872175 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.754976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGATG AAAACGCCCT GCGTCAGGAA ATCTGCGACG TCGGCCGGCT GTTGTATGGC
CGTGGCTACA CGGTCGGCAG CGCGGGCAAC ATCAGCGCAC GTCTTGATGA CGGCTGGCTG
ATCACCCCGA CCGACGCCTG CCTGGGCCGC ATGGACCCGG CAGACATCGC CAAAGTCAAT
CTGGCCGGTG AATGGGTGTC CGGCAGCAAG CCGTCCAAGA CATTGGCGCT GCACCGCGAA
GTTTATGACC GCAACCCGGA AGTCGGCGGC GTGGTGCACA CCCACTCGAC GCATCTGGTG
GCGCTGACCC TGGCCGGCGT GTGGCGTGAA GATGACATCC TGCCGCCACT GACGCCCTAT
CAAGTCATGA AAGTCGGGCA CATTCCGTTG ATCCCTTACG AGCGTCCGGG CTCGCCGAAA
GTCGCCGAGC GCGTGGCGGA GCTGGCCAAC AGCGTACGCG GCGTGATGCT TGAGCGGCTC
GGCCCGGTGG TCTGGGAAAG CTCGGTGGCC AAGGCTTGTT ACGCCCTGGA AGAGCTGGAA
GAAACCGCCC GTCTGTGGCT GATAAGCAAC CCTAAACCTG CACCGCTGGC CCCGGCGGCG
CTGGAAGAAT TGCGTCAGGT GTTCGGCGCG AAGTGGTAA
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| Protein sequence | MIDENALRQE ICDVGRLLYG RGYTVGSAGN ISARLDDGWL ITPTDACLGR MDPADIAKVN
LAGEWVSGSK PSKTLALHRE VYDRNPEVGG VVHTHSTHLV ALTLAGVWRE DDILPPLTPY
QVMKVGHIPL IPYERPGSPK VAERVAELAN SVRGVMLERL GPVVWESSVA KACYALEELE
ETARLWLISN PKPAPLAPAA LEELRQVFGA KW
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