Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4938 |
Symbol | |
ID | 1186623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5596856 |
End bp | 5598043 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637396259 |
Product | ATP phosphoribosyltransferase regulatory subunit, putative |
Protein accession | NP_794671 |
Protein GI | 28872052 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis |
TIGRFAM ID | [TIGR00443] ATP phosphoribosyltransferase, regulatory subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACGG TTGACCGCTG GCTGCTACCA GATGGCATCG AAGAAGTACT GCCACCGGAA GCGGCGCGCA TTGAAGTAGC GCGTCGTCAG GTGTTGGATC TGTTTCAGAG CTGGGGCTAT GAGTTTGTCG TCACCCCGCA TATCGAGTAT CTGGAGTCCT TGCTGACAGG GGCGGGTTCG GATCTGGATC TGCGCACCTT CAAGGTTATC GATCCGCAAT CGGGCCGGCA GATGGGCTTT CGCGCCGACA TCACGCCACA GGTTGCACGC ATCGATGCCC ACACGCTTAA ACGTGAAGGC CCGAGTCGTC TGTGCTATGC GGGCAGCGTA CTGCACGCTC AGCCGCGCGC GCTGTCTTCG TCGCGCAGCC CGATTCAGCT GGGTGCCGAG TTGTACGGCG ACGCAAGCCC GAGCAGTGAT GTCGAGGTCA TCAGTCTGAT GCTGGCCATG CTGCAACTGG CCGATGTGCC AGATGTGCAC ATGGACCTCG GGCATGTCGG CATCTACCGT GGTCTGGCGC GTGCCGCCGG CCTGTCGGGC GAAGTCGAGC AGCAGTTGTT CGATGCATTG CAACGCAAGG CCATCGACGA AGTGGTTGCC CTGACGGCCA ATCTGCCGCC AGAGCTGGCT TCGATGCTGC GTGCACTGGT TGATCTGTGC GGTGGTCGCG AGGTGCTGGA TGCGGCCCGT GACCGTCTGG CTGGCGCACC TGCGCCGGTG CTGGAAGCGC TGGATGACCT GCTGGCCATC GCCGATCGTC TGGCGGCGCG CTTCCCGCAA CTGCCGTTGT ATTTCGATCT CGGCGAGCTG CGTGGCTACC ACTACCATAC CGGTGTGGTA TTCGCCGTGT TCGTGCCGGG TGTGGGGCAG TCGATTGCCC AGGGCGGTCG TTACGATGAC ATCGGTGCCG ATTTCGGTCG TGCCCGCCCG GCGACCGGCT TTTCCACTGA CCTGAAAACC CTGGTCACCC TTGGGCAGGC AGAAATCGTA TTACCGTCCG GTGGCATCTG GATGCCGGAC AGCACGGATG CGGCACTCTG GCAGCAGGTT TGCCAGTTGC GCAGCGAAGG TCAGCGTGTG GTTCAGGCCT TGCCTGGGCA GCAGGTGAGT GCGGCGCGTG AAGCCGACTG TGACCGGCAA TTGATTCAGC ATGGCGAGCA CTGGCAGGTA ATGCCGCTGG CTTCTTGA
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Protein sequence | MATVDRWLLP DGIEEVLPPE AARIEVARRQ VLDLFQSWGY EFVVTPHIEY LESLLTGAGS DLDLRTFKVI DPQSGRQMGF RADITPQVAR IDAHTLKREG PSRLCYAGSV LHAQPRALSS SRSPIQLGAE LYGDASPSSD VEVISLMLAM LQLADVPDVH MDLGHVGIYR GLARAAGLSG EVEQQLFDAL QRKAIDEVVA LTANLPPELA SMLRALVDLC GGREVLDAAR DRLAGAPAPV LEALDDLLAI ADRLAARFPQ LPLYFDLGEL RGYHYHTGVV FAVFVPGVGQ SIAQGGRYDD IGADFGRARP ATGFSTDLKT LVTLGQAEIV LPSGGIWMPD STDAALWQQV CQLRSEGQRV VQALPGQQVS AAREADCDRQ LIQHGEHWQV MPLAS
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