Gene PSPTO_4938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4938 
Symbol 
ID1186623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5596856 
End bp5598043 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content62% 
IMG OID637396259 
ProductATP phosphoribosyltransferase regulatory subunit, putative 
Protein accessionNP_794671 
Protein GI28872052 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3705] ATP phosphoribosyltransferase involved in histidine biosynthesis 
TIGRFAM ID[TIGR00443] ATP phosphoribosyltransferase, regulatory subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGG TTGACCGCTG GCTGCTACCA GATGGCATCG AAGAAGTACT GCCACCGGAA 
GCGGCGCGCA TTGAAGTAGC GCGTCGTCAG GTGTTGGATC TGTTTCAGAG CTGGGGCTAT
GAGTTTGTCG TCACCCCGCA TATCGAGTAT CTGGAGTCCT TGCTGACAGG GGCGGGTTCG
GATCTGGATC TGCGCACCTT CAAGGTTATC GATCCGCAAT CGGGCCGGCA GATGGGCTTT
CGCGCCGACA TCACGCCACA GGTTGCACGC ATCGATGCCC ACACGCTTAA ACGTGAAGGC
CCGAGTCGTC TGTGCTATGC GGGCAGCGTA CTGCACGCTC AGCCGCGCGC GCTGTCTTCG
TCGCGCAGCC CGATTCAGCT GGGTGCCGAG TTGTACGGCG ACGCAAGCCC GAGCAGTGAT
GTCGAGGTCA TCAGTCTGAT GCTGGCCATG CTGCAACTGG CCGATGTGCC AGATGTGCAC
ATGGACCTCG GGCATGTCGG CATCTACCGT GGTCTGGCGC GTGCCGCCGG CCTGTCGGGC
GAAGTCGAGC AGCAGTTGTT CGATGCATTG CAACGCAAGG CCATCGACGA AGTGGTTGCC
CTGACGGCCA ATCTGCCGCC AGAGCTGGCT TCGATGCTGC GTGCACTGGT TGATCTGTGC
GGTGGTCGCG AGGTGCTGGA TGCGGCCCGT GACCGTCTGG CTGGCGCACC TGCGCCGGTG
CTGGAAGCGC TGGATGACCT GCTGGCCATC GCCGATCGTC TGGCGGCGCG CTTCCCGCAA
CTGCCGTTGT ATTTCGATCT CGGCGAGCTG CGTGGCTACC ACTACCATAC CGGTGTGGTA
TTCGCCGTGT TCGTGCCGGG TGTGGGGCAG TCGATTGCCC AGGGCGGTCG TTACGATGAC
ATCGGTGCCG ATTTCGGTCG TGCCCGCCCG GCGACCGGCT TTTCCACTGA CCTGAAAACC
CTGGTCACCC TTGGGCAGGC AGAAATCGTA TTACCGTCCG GTGGCATCTG GATGCCGGAC
AGCACGGATG CGGCACTCTG GCAGCAGGTT TGCCAGTTGC GCAGCGAAGG TCAGCGTGTG
GTTCAGGCCT TGCCTGGGCA GCAGGTGAGT GCGGCGCGTG AAGCCGACTG TGACCGGCAA
TTGATTCAGC ATGGCGAGCA CTGGCAGGTA ATGCCGCTGG CTTCTTGA
 
Protein sequence
MATVDRWLLP DGIEEVLPPE AARIEVARRQ VLDLFQSWGY EFVVTPHIEY LESLLTGAGS 
DLDLRTFKVI DPQSGRQMGF RADITPQVAR IDAHTLKREG PSRLCYAGSV LHAQPRALSS
SRSPIQLGAE LYGDASPSSD VEVISLMLAM LQLADVPDVH MDLGHVGIYR GLARAAGLSG
EVEQQLFDAL QRKAIDEVVA LTANLPPELA SMLRALVDLC GGREVLDAAR DRLAGAPAPV
LEALDDLLAI ADRLAARFPQ LPLYFDLGEL RGYHYHTGVV FAVFVPGVGQ SIAQGGRYDD
IGADFGRARP ATGFSTDLKT LVTLGQAEIV LPSGGIWMPD STDAALWQQV CQLRSEGQRV
VQALPGQQVS AAREADCDRQ LIQHGEHWQV MPLAS