Gene PSPTO_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4892 
Symbol 
ID1186575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5542269 
End bp5542811 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content62% 
IMG OID637396212 
Productphosphinothricin N-acetyltransferase, putative 
Protein accessionNP_794626 
Protein GI28872007 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGACC CGATTCGCGA TGCGCTGGCG GACGATCTGC CGGGCATTCT GGCTATCTAC 
AACGATGCGG TGCTCAACAC CACGGCCATC TGGAACGAAC AGCCGGTCGA TCTCGCCAAT
CGCGAGGCCT GGTACACATC TCGTCAGGCC CAGGCCTATC CAGTCCTGGT CGCTGTCGAC
AGCGCAGGCG AAGTGCTGGG TTATTCGTCG TTTGGCGACT GGCGGCCGTT TGAAGGGTTT
CGTCACACGG TCGAGCATTC GGTCTACGTA CGCGCCGATC AACGTGGCAA AGGCCTGGGG
CCGCGCTTGA TGGCTGAGTT GATCGAACGC GCCCGCGCCT GCGACAAGCA CATGATGGTC
GCGGCGATCG AAAGCGGCAA CGCTGCCTCC ATCGCCTTGC ACGAGCGTCT AGGCTTCAAG
ACTACCGGGC AGATGCCACA GGTCGGCACC AAGTTCGGCC GCTGGCTGGA CCTGACCTTC
ATGCAGCTCG ACCTGTCGCC CGGTGCTTGC GCACCCGCCT CGCAAGCGCC TCAATCACTC
TAG
 
Protein sequence
MHDPIRDALA DDLPGILAIY NDAVLNTTAI WNEQPVDLAN REAWYTSRQA QAYPVLVAVD 
SAGEVLGYSS FGDWRPFEGF RHTVEHSVYV RADQRGKGLG PRLMAELIER ARACDKHMMV
AAIESGNAAS IALHERLGFK TTGQMPQVGT KFGRWLDLTF MQLDLSPGAC APASQAPQSL