Gene PSPTO_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4880 
Symbol 
ID1186563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5527735 
End bp5528475 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content62% 
IMG OID637396200 
Productprecorrin-6x reductase, putative 
Protein accessionNP_794614 
Protein GI28871995 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2099] Precorrin-6x reductase 
TIGRFAM ID[TIGR00715] precorrin-6x reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA TTCTGCTGTT GGGCGGCATT ACCGAAGCGC TGGCGATTGC ACGCAAGCTC 
GGGCCTGAGC ACATCTACAG CCTGGCGGGC GTTGGCCGGG TGCCGACCGA TCTGGCCTGT
CAGTTGAAAG TCGGCGGCTA CGGCGGCGCA GAGGGCATGG CGCAGTACAT TCGCGACCAG
GGTGTTGATC TGCTGCTTGA TGCTACCCAT CCGTATGCCG CGCAGATCAG CCGCAATGCC
GCGCTGGCGG CCCGGATTGC TGGCATTCCC TGCTGGGCCT TGCGCCGCAC GGCATGGCAG
CCCGGCCCCG ACGATGACTG GCGCGAAGTG GCCGACTGGT CAGCGCTGGT CACGGCACTG
GCCCCTTTCA AGCGCCCGCT GTTCACGCTG GGTCGCGAGC CCTTGCAGCA TCTCAATGAA
ATCCCGAAAC ATCAGTTCTG GACACTGCGT GCACTGGACA GCTATCCCGG CAACGACCGC
TGCGAAGTGA TCGGCGCGCG CGGTCCGTTT GTGCTGGAAG ACGAACGCCA ACTGTTTGAA
CAACGCAATA TCGACGTGCT GATCAGCAAA AACAGCGGCA GCAGCTCCAC CGAACCCAAA
CTGGACGTCG CCCGCGAACG CGGCCTGCCC GTCCTCATCT TGAAACGCCC GCAGTTGCCT
GACGTGGACA GGATTTTGTG GAGCGTGGAT GAGGTACTTG GGGTGTTGGG GCTTGCTGAA
ACCAGCCCAA AACCACGATA G
 
Protein sequence
MKRILLLGGI TEALAIARKL GPEHIYSLAG VGRVPTDLAC QLKVGGYGGA EGMAQYIRDQ 
GVDLLLDATH PYAAQISRNA ALAARIAGIP CWALRRTAWQ PGPDDDWREV ADWSALVTAL
APFKRPLFTL GREPLQHLNE IPKHQFWTLR ALDSYPGNDR CEVIGARGPF VLEDERQLFE
QRNIDVLISK NSGSSSTEPK LDVARERGLP VLILKRPQLP DVDRILWSVD EVLGVLGLAE
TSPKPR