| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4864 |
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| Symbol | |
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| ID | 1186547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5509603 |
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| End bp | 5510616 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396184 |
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| Product | TIM-barrel protein, putative, NifR3 family |
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| Protein accession | NP_794598 |
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| Protein GI | 28871979 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGGCAG TACGCATCGG CCCGTATACA GTGCACAACG GCTTGATCCT CGCCCCGATG
GCGGGCGTCA CCGACCAGCC TTTCCGTCAG CTGTGCCGAC AACTCGGTGC TGGCCTGGTG
GTATCGGAAA TGGTCACCAG TGACATGAGC CTGTGGAACA GCCGCAAATC GCGTCTGCGC
ATGATCCACG CAGGTGATCC CGAGCCCCGC TCGGTACAGA TCGCTGGTGG TGACGCGCAG
ATGATGGCAG ACGCAGCACG TGCCAATGTT GAACTGGGTG CCCAGATCAT CGACATCAAC
ATGGGCTGCC CGGCCAAGAA GGTCTGTAAC AAGGCGGCAG GTTCGGCGCT GTTGAAAGAC
GAGCAACTGG TCAACGACAT CCTGCAGGCC GTTGTGGCTG CGGTCGATGT GCCGGTCACG
CTGAAGATCC GCACCGGCTG GGACCGCGAC AACCGTAACG GCCTGACCGT GGCGAAAATC
GCCGAGCAGG CGGGCATTCA GGCGCTGGCG GTGCACGGGC GAACCCGTGC CGACCTTTAC
ACCGGCGAGG CCGAGTACGA CACCATTGCC ATGATCAAAC AGGCAGTGTC GATTCCGGTC
TTTGCCAATG GCGACATCGA TTCACCCGAA AAAGCCCGGC ACGTGCTACA GGCCACCGGC
GCAGACGGAT TACTGATTGG CAGGGCCGCC CAGGGGCGTC CCTGGATTTT TCGCGAGATA
GAACACTACC TGCTTACCGG AAAAACACTC CCGGCCCTGC AGTCGAGTGA AGTGGAACGC
ATTCTGCTTG AGCATCTGGC AGCGCTCCAC GTTTTCTATG GCGACGTGAT GGGCGTGCGT
ATTGCACGCA AACACGTTGG TTGGTATCTC GCAACCCTGC CGGGCGCCAG GGAGTTTCGC
GCCCTCTTCA ATCGTTTGGA AGATACGGAA GCACAGTGCG CCAACGTTCG GGAGTTCTTC
AGCCAAGGCT GCAAGGGCCC GGATAACCAG AATGATAAAG AGGTGGCCGC ATGA
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| Protein sequence | MSAVRIGPYT VHNGLILAPM AGVTDQPFRQ LCRQLGAGLV VSEMVTSDMS LWNSRKSRLR
MIHAGDPEPR SVQIAGGDAQ MMADAARANV ELGAQIIDIN MGCPAKKVCN KAAGSALLKD
EQLVNDILQA VVAAVDVPVT LKIRTGWDRD NRNGLTVAKI AEQAGIQALA VHGRTRADLY
TGEAEYDTIA MIKQAVSIPV FANGDIDSPE KARHVLQATG ADGLLIGRAA QGRPWIFREI
EHYLLTGKTL PALQSSEVER ILLEHLAALH VFYGDVMGVR IARKHVGWYL ATLPGAREFR
ALFNRLEDTE AQCANVREFF SQGCKGPDNQ NDKEVAA
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