| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4833 |
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| Symbol | |
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| ID | 1186516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5472317 |
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| End bp | 5475016 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396153 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_794567 |
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| Protein GI | 28871948 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGTGT CCAGCGAGCC CGATCCGATC GGCGCCGACC TTTATCTACT GCTTGACGAA
GAGGGGCGGA TACAGAGCAT CAGCCCGCAA TTGCTTGCGC GACTGGGCAT GGCAGCGCCG
ACGTTCGCTG CTCTGCGGCT GATGAACCTG CTGCTGCCCA ATAGCGCGCT GGTCGTTGAA
GGGGTGCCGC ATGACTGGCT GGGGCACATG CTCGATCTGG ACTTCAAGAG CGCCGACACG
CACACCTTGC ACGCCCGCGG CTGGGTCCAG GCGCACGGCA AGGGCTGGCT GCTGCAATTG
CTGGATATCA GCGACCTGAT GGAAGAAGCC AACGCCGCTC GCAGTCGCCA GCAGTGCTTG
CGGTTCGCCG GGCAGATGGC CGAGCGTGTG CGTGTGTGCA ACGTGGAACG GCTGACGGCG
GTGGCGGCCG AACAGCTGGA AGAGCTGGCG CAGCTGTGGC GTATTCCTTG TGTGGCGCTG
GTGTTGCCGG AGGTTAGCGG TGTCGGCTGG CGTGTCTACT GCCAGTACAG CGCGCATACG
GCACCGGAAC TGTGGCAGGT CGGACAGCGA CTGGGGACGG CGCTGGACCG CTTCGATGCC
AATATCACCC ATCAATTGAG GTTTGGCAGC GGCGTCGATC AAGGGCCGTT GCAGAGTGTG
TTCGCTAACG CTGACGGTTT TCTGATCCCG CACAGTCGTG ACAACGCTCC CAAAGCCTGG
CTGATGTTCG GCTTCTATGA CCCGCGACAG CAGGCACCCG ACCTCGGTGA GCGTGAGTGG
CTGAACCTCT GCTCGGCGCT GGCAGGTCCG GTGCTGTTTC GCTTGTCCGA ACAGCACAAC
CGTCACCACG TCGAGCGGCT GGCCGTGCTT CAAGGGCTGC TGGGTACCGG GTGGTGGGAG
CTGATGCCCG CCAGCGACGA GGTCCTGCTG GCCCCGCAAC TGGCGCGCAG TCTGCGTCTG
GCTGACAGGG TCGAAAGCCT GTCACGTCAG GACTGGCTGG CGATGATTCA TCCGGCAGAC
CGCCAGGAGC TTTCCAGCCG TCTCGCCCAG TTGCGTGACA AAGGCACGCC ATTGCTGCTC
TGCGTGCGTC TGGCGCAGAG TGACCCCGCG CAGGAAACCC TTTGGTTTCG TATTCAGGGC
CAGGCGCTGA TCAGCGGGCA GGTGAAGCGC GTGCTGGGTT TCATGCTCGA TGTCAGCGAT
ATCAAGAACC AGGAAACCGA GGCGGCTGCC GCCCATGCCC GGCTGGATAA CCTGATTGCC
AGCTCACCGG CGGTGATCTA CGTGCAGCGT TACGATCAAG GCAACCTGGA GCCGACTTTT
TTCAGTGACA GCCTCACGCC TTTGCTGGGC TGGACGCTGG CCGACTGCAT CGAGGGGCAA
CTGGCTGAAT ACATCCACCC CGAAGACCGC GACATCTGGT TCGAGCGCAA TCGGCAGTTG
CTGCGTGAAG GCTTGGTCAG CCGGCGATAC CGGTTGCGCG ACAAGGGTGG CAATTATCAC
TGGCTGCTGG ACGAGGCCCG GCTGTTGCGC GATGACCTCG GCATGCCGGT GGAGGCAGTC
GGTTTATGGC TGGATGTTAC CGAAGCCACA CTGGCGGCCG AGCAAGTGCG CCAGAGCGAA
GAGCGCTATC GCATTCTGGT TGAAGATTCT CCAGCGATGA TCTGTCGCTA TTCGCCTGAT
CTGGTGCTCA GTTTCGGCAA CCGGCCGCTG GCCAACTACA TGGAATGCAC CCCGGAGCAA
CTGACCGGGA TCAATCTCGG CGACTGGCTC TCGGATGAGC AGCGCGAAGC GTTCATTCGG
CGCATCGGCC TGCTGACGCC TGAGGCGCCG TTGAGCACCG AAGAAATCTG CATCGAGTTG
CCCGGCCGTG AATACGCCTG GTGGGTGTGG GCCGACCGGG GCATTTTCGA TGAGCATGGC
ACGCTGGTCG AGGTGCAGGC CGTGGGCCGC GACAACACCG ACGTGCGCCG CTCGAGGATG
CAGTTGAATC AGAGCGCCAA GATGGCGACG CTCGGCGAAA TGTCCACCGG ACTGGCTCAC
GAGATCAATC AGCCGCTCAA CGTCATGCGC ATGGCGGTGG TCAACGTCTT GAAGCGCCTT
AGCAGGGGCG ATGTGGATAT CGAATACCTC ACTGAAAAAC TCACGCGTAT CGACACGCAG
GTGCAACGTG CCGCCCGTGT GGTTGACCAC ATGCGGGTGT TCGGTCGGCG TTCCGAGGTC
GAAGAGCAAC TGTTCGATCC GGCTCAGGCC GTTGAAGGCA CTCTTTCGAT GCTGGCCGAG
GGCATGAAAG GCAAGGGCGT GCAGATTCGC GTCGGGAGCA TGATTGAGGC GGTGCGGGTG
CGTGGGCATG TCGATCAGCT GGAGCAGGTG CTGATCAACC TGATGGTCAA TGCCCGGGAT
GCCTTGCTGT CGCGGCGTGA AAAAGACCGT GAGTTCGAGC CGTGGATCAG TGTCGAAGCC
GAGCGGGATG AAAATATCAT CCGCCTGGTG GTTCAGGACA ACGGCGGCGG TATTGACCCG
CGTTTGCTGG AGCGCATTTT CGAGCCGTTC TTCACCACCA AGCCTGTCGG GGTCGGCACC
GGGCTGGGCT TGTCGGTCAG TTACGGCATC GTCGATCAGA TGGGCGGCCA GCTCAGTGTC
AGCAACGTGG GCGAGGGCGC GCGTTTTCGC ATCGAACTGC CGATCTTCAA TGAAGGCTAG
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| Protein sequence | MPVSSEPDPI GADLYLLLDE EGRIQSISPQ LLARLGMAAP TFAALRLMNL LLPNSALVVE
GVPHDWLGHM LDLDFKSADT HTLHARGWVQ AHGKGWLLQL LDISDLMEEA NAARSRQQCL
RFAGQMAERV RVCNVERLTA VAAEQLEELA QLWRIPCVAL VLPEVSGVGW RVYCQYSAHT
APELWQVGQR LGTALDRFDA NITHQLRFGS GVDQGPLQSV FANADGFLIP HSRDNAPKAW
LMFGFYDPRQ QAPDLGEREW LNLCSALAGP VLFRLSEQHN RHHVERLAVL QGLLGTGWWE
LMPASDEVLL APQLARSLRL ADRVESLSRQ DWLAMIHPAD RQELSSRLAQ LRDKGTPLLL
CVRLAQSDPA QETLWFRIQG QALISGQVKR VLGFMLDVSD IKNQETEAAA AHARLDNLIA
SSPAVIYVQR YDQGNLEPTF FSDSLTPLLG WTLADCIEGQ LAEYIHPEDR DIWFERNRQL
LREGLVSRRY RLRDKGGNYH WLLDEARLLR DDLGMPVEAV GLWLDVTEAT LAAEQVRQSE
ERYRILVEDS PAMICRYSPD LVLSFGNRPL ANYMECTPEQ LTGINLGDWL SDEQREAFIR
RIGLLTPEAP LSTEEICIEL PGREYAWWVW ADRGIFDEHG TLVEVQAVGR DNTDVRRSRM
QLNQSAKMAT LGEMSTGLAH EINQPLNVMR MAVVNVLKRL SRGDVDIEYL TEKLTRIDTQ
VQRAARVVDH MRVFGRRSEV EEQLFDPAQA VEGTLSMLAE GMKGKGVQIR VGSMIEAVRV
RGHVDQLEQV LINLMVNARD ALLSRREKDR EFEPWISVEA ERDENIIRLV VQDNGGGIDP
RLLERIFEPF FTTKPVGVGT GLGLSVSYGI VDQMGGQLSV SNVGEGARFR IELPIFNEG
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