Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4831 |
Symbol | |
ID | 1186514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5468838 |
End bp | 5470154 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637396151 |
Product | PAP2 superfamily protein/DedA family protein |
Protein accession | NP_794565 |
Protein GI | 28871946 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0735581 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGACC TGCTCAATGG CATGACCGGC TGGCTGACGG CGAACCCTTC CTGGGTGGCT GTCGCGATCT TTTTAGTCGC ATTCACCGAA TGCGTCGCGA TTGTCGGGAT CGTTGTGCCG GGCACCGTGA TCATGTTTGC GATTGCCGCG CTGGCGGGTA GCGGCATTCT GCCGTTGAGC GAAGTGCTGT TACTGGGCTT TCTGGGCGGG CTGCTGGGGG ACGCGGTGTC TTACTTCATC GGCAGGCGCT TTCATCAGAA CATTCGCCAG TTGCCGGGCC TGCGCACCCA CCCGGAATGG ATGGCCGGCG CCGAGAGCTA CTTCCATCGC TATGGCATTG CCAGCCTGCT GGTGGGGCGC TTCATCGGCC CTTTGCGGCC GATGCTGCCG ATGATTGCCG GCATGTGCGA CATGCCGCTG CCGCGCTTTA TCGCCGTCAG CGTGCTCGCC GCCGCTGGCT GGTCGATTGC CTACCTGATG CCGGGCTGGG CTGCGGGCGC TGCCATTCGC CTGCCGTTGC CAGAGGGCTT CTGGCCAGAG GCGGCAGTGG TCGGCACCGG GCTGGCGGTG CTGTTCGGGC TGAGCATTCA AAGCAGCGTG CGCCAGAAAC GCTACGCAAC CAAGCTGATT TCCGTGCTCA GCCTGACGCT GGTCGCCGCG CTGTTCATCG GCTGGCCTTA CCTGGCTGAT TTCGACAACG GCCTGATGAC GCTCATCCAG GAACACCGCA GCGAAGCCGC GCAGAACATC GTGCTGTTCG TCACCAGCAT CGGCGACTTC AAGGCCCAGT TGCTCGCGGC CTCCCTGCTG ATCATTGTCC TGGCGGTTGC GAGGCAGTGG CGCCACGCGA CCTTCGCCCT GGCTGCCACG CTGGGCACCG CTGTCGCCAA CGGCCTCCTG AAAACCTTCT TCGCCCGCGC CCGTCCGGAC GTGCTGGTCG ACCCCTTGAC CACCTACAGC ATGCCCAGCG GGCACAGCTC CGCAGCCTTT GCGCTGTTCA TGACGCTTGC CGTGCTGGCC GGGCGTGGCC AGCCAGTGCG CCTGCGTCTG AGCTGGATGT TGCTGTGTGG CATTCCGGCC TTGGCGATTG CCTTGTCGAG GGTGTATCTG GGAGTGCACT GGCCAACCGA CGTGCTGGCC GGGATGCTGC TGGCGTTCTG CGTTTGCGCC GCCAGCCTCG CATTCATTCA GCGCAAGGAA CCCCTGCCAG CCATGTCGGT ACGGGTCTGG TGGCTGATCG TCCCGGCGAT GACCGCACTG CTCGGTATAT TTGCGGTGCG CGCCCTGTCG CATGCGGTGC TGCGCTATCA GTACTGA
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Protein sequence | MGDLLNGMTG WLTANPSWVA VAIFLVAFTE CVAIVGIVVP GTVIMFAIAA LAGSGILPLS EVLLLGFLGG LLGDAVSYFI GRRFHQNIRQ LPGLRTHPEW MAGAESYFHR YGIASLLVGR FIGPLRPMLP MIAGMCDMPL PRFIAVSVLA AAGWSIAYLM PGWAAGAAIR LPLPEGFWPE AAVVGTGLAV LFGLSIQSSV RQKRYATKLI SVLSLTLVAA LFIGWPYLAD FDNGLMTLIQ EHRSEAAQNI VLFVTSIGDF KAQLLAASLL IIVLAVARQW RHATFALAAT LGTAVANGLL KTFFARARPD VLVDPLTTYS MPSGHSSAAF ALFMTLAVLA GRGQPVRLRL SWMLLCGIPA LAIALSRVYL GVHWPTDVLA GMLLAFCVCA ASLAFIQRKE PLPAMSVRVW WLIVPAMTAL LGIFAVRALS HAVLRYQY
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