Gene PSPTO_4827 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4827 
Symbol 
ID1186510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5465486 
End bp5465857 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content58% 
IMG OID637396147 
Productiojap-related protein 
Protein accessionNP_794561 
Protein GI28871942 
COG category[S] Function unknown 
COG ID[COG0799] Uncharacterized homolog of plant Iojap protein 
TIGRFAM ID[TIGR00090] iojap-like ribosome-associated protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.943671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGTG AAGAAGTCGT GCAGGTTGCC ATCGCAGCCC TGGAAGAGGT CAAGGGTGGC 
GACATTCTGA CCATCGATGT GCGTGAAAAG ACCAGCATCG CTGATTACAT GCTGATCTGC
ACCGGTACTT CCAATCGCCA GCTGAACGCA TTGGTCGACA ACGTTCGTGA CAAGGTCAAG
GCTGCCGGCC TGAAATCCCT GAGCGAAGAA GGCAAGGGCG ACAGTGACTG GGTTCTGCTG
GACCTGGGCG ATGTGATCGT TCACGTGATG ACCGCTGCGG CACGCCAGTT CTATGACCTG
GAGCGTCTGT GGAAAGGTGC CGAGCTGAGC CGCGCCGCCA GCGCTGCGCA CCACACGCCA
GGCAACGAAT AA
 
Protein sequence
MSSEEVVQVA IAALEEVKGG DILTIDVREK TSIADYMLIC TGTSNRQLNA LVDNVRDKVK 
AAGLKSLSEE GKGDSDWVLL DLGDVIVHVM TAAARQFYDL ERLWKGAELS RAASAAHHTP
GNE