Gene PSPTO_4823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4823 
SymbolmltB 
ID1186506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5460924 
End bp5461931 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content60% 
IMG OID637396143 
Productmembrane-bound lytic murein transglycosylase B 
Protein accessionNP_794557 
Protein GI28871938 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02282] lytic murein transglycosylase B 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGCAA TGCGTAACTG GGCTCGATAT GCTCCGGTGG TCGGCCTGGT GGGCATCCTT 
GGGTCGGTGC AAGAGGCACT GGCCGGTGAT TACGAAGGTT CGCCCCAGGT GGCCGAGTTC
GTCGGTGAAC TGACCCGCGA CTACGGTTTT GCCGGCGAGC AGTTGATGGG CCTGTTTCGT
GAGGTCGAGC GCAAGCAGGC CATTCTGGAT GCCATTTCGC GCCCGGCTGA ACGGGTCAAG
CAGTGGAAAG AGTATCGGCC GATGTTCATC ACTGACACGC GCATAGCCCG CGGTGTCGAT
TTCTGGCGTC AGCACGAGGC CGCATTGGCC CGCGCCGAGC AGGAATATGG CGTACCGGCG
CAGATCATCG TTTCGATCAT CGGCGTCGAA ACCTTTTTCG GCCGCAACAC CGGTAATTAC
CGGGTGATCG ACGCCTTGTC GACGCTCGGT TTCGATTACC CGCCGCGCGC CCCGTTCTTC
CGCAAGGAAC TGCGTGAGTT CCTGCTGCTG GCCCGCGAGC AACAGGTCGA TCCGCTGACC
CTGAAAGGCT CGTATGCCGG CGCAATGGGC CTGCCGCAAT TCATGCCGAG CAGCTTCCGC
GCTTATGCAG TGGACTTTGA CGGCGACGGT CACATCAACA TCTGGACCGA CCCGGACGAC
GCCATCGGCA GCGTGGCCAG CTATTTCAAG CGTCATGGCT GGGTGGCCGG CCAGCAGGTC
GTCAGCCGCG CAACGGCGCG TGGCGACCGG GTTGATGAAG GCTTGAGCCC TGCACTTGAT
CCGGTAATGT CGGTCGGGGA GTTGCGACAG CTGGGTTGGG CAAGTCATGA TGCGCTGCGC
GACGACATGC CGGTGACGGC ATTCCGTCTT GAAGGCGACA ATGGTCCCGA ATACTGGCTG
GGTCTGAACA ATTTTTATGC AATCACCCGT TATAACCGCA GTGTGATGTA CGCCATGGCC
GTGTATCAGC TGTCTGAATC GTTGGTTCAA GCTCGAGGCG TCAAGTAA
 
Protein sequence
MQAMRNWARY APVVGLVGIL GSVQEALAGD YEGSPQVAEF VGELTRDYGF AGEQLMGLFR 
EVERKQAILD AISRPAERVK QWKEYRPMFI TDTRIARGVD FWRQHEAALA RAEQEYGVPA
QIIVSIIGVE TFFGRNTGNY RVIDALSTLG FDYPPRAPFF RKELREFLLL AREQQVDPLT
LKGSYAGAMG LPQFMPSSFR AYAVDFDGDG HINIWTDPDD AIGSVASYFK RHGWVAGQQV
VSRATARGDR VDEGLSPALD PVMSVGELRQ LGWASHDALR DDMPVTAFRL EGDNGPEYWL
GLNNFYAITR YNRSVMYAMA VYQLSESLVQ ARGVK