Gene PSPTO_4822 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4822 
Symbol 
ID1186505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5459896 
End bp5460924 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content62% 
IMG OID637396142 
Productlipoprotein, rlpA family 
Protein accessionNP_794556 
Protein GI28871937 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGGCAT CGCCGATTCT TCAATCATTC AAGCTTCTGG CGTTGACTGG CCTGGCAGTG 
CTGGTCGCCA GTTGCTCGTC GCCGTCACGC ACAACGTCGT CGCAGTCGCC AAAAGGCGGT
GCAGTTGTAC GCACCATGCC GGGCCTGGAC ATCAACCGTG CTCACAAGGA CGGCGCGCCG
TGGTGGGACG TGGATGTTTC GCGCATCCCC GATGCCACGC CGACCCTGCA CACCGGGGCC
TACAAGGCCA ACCCGTACAC CGTGCTGGGC AAGACCTATT TCCCCATGAG CGATTCCAGG
CGCTACGTCG CTTCGGGCAC CGCCTCCTGG TATGGCACCA AGTTTCATGG CCAGAACACC
GCCAATGGCG AGGTTTACGA CCTGTACGGC ATGAGTGCCG CGCACAAGAC CCTGCCGCTG
CCCAGCTACG TCAAAGTGAC CAACCTGGAC AACAACCGCA CGGTGATTCT GCGGGTCAAC
GACCGTGGGC CGTTTTATTC GGACCGCATC ATCGACCTGT CCTACGCCGC CGCCAAAAAG
CTCGGTTACG CCGAAAGCGG CACTGCGCGG GTCAAGGTCG AAGGTATCGA CCCGCAGGAA
TGGTGGGCGC AACGTGGCCG TCCGGCACCG CTGATGCTCA ATCAGCCACA AGTGATGGCC
CAGGCAACAC CGCCAGCGCT GTCCACTTCC ACCGGCACCG TCGAACAATA CACACCGCCA
CCCCAGCAGC ACGCTGCACC TGTCGTGCCG TTGCAGGTTG ACGCAAAAAA AAACGCTTCA
GGACAAGCCG CTGGGCTGTT TCTCCAGGTG GGAGCCTTCG CCAACCCGGA CGCTGCGGAG
CTCCTGAGGT CGAAACTGAG CGGGATGGTT CGAGCGCCGG TGTTCGTCAG CTCGATCGCT
CGCAATCAGC AAACGCTCTA TCGGGTCCGG ATGGGACCGA TCGACACGCC GGGTGAAGCC
CAGCAGCTGC AAAACAGCGT CAGGTCGGCC AATCTGGGCC AGCCGAGCGT AGTGACATCG
GATCAGTAA
 
Protein sequence
MRASPILQSF KLLALTGLAV LVASCSSPSR TTSSQSPKGG AVVRTMPGLD INRAHKDGAP 
WWDVDVSRIP DATPTLHTGA YKANPYTVLG KTYFPMSDSR RYVASGTASW YGTKFHGQNT
ANGEVYDLYG MSAAHKTLPL PSYVKVTNLD NNRTVILRVN DRGPFYSDRI IDLSYAAAKK
LGYAESGTAR VKVEGIDPQE WWAQRGRPAP LMLNQPQVMA QATPPALSTS TGTVEQYTPP
PQQHAAPVVP LQVDAKKNAS GQAAGLFLQV GAFANPDAAE LLRSKLSGMV RAPVFVSSIA
RNQQTLYRVR MGPIDTPGEA QQLQNSVRSA NLGQPSVVTS DQ