| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4821 |
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| Symbol | |
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| ID | 1186504 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5458494 |
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| End bp | 5459654 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396141 |
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| Product | D-alanyl-D-alanine carboxypeptidase |
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| Protein accession | NP_794555 |
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| Protein GI | 28871936 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA CCACCTTTGC AAAACGTTTG TGCCTGCTTG TTCCACTGAT TATCACCCCG
GCTGCCTGGG CTGCGGAGCA GATGACGCCT GCCGCACCGC AACTGGCCGC CAAGTCCTAC
GTGCTGATGG ACGCTACCAG CGGCAACGTT CTGGTCGAGA ACAACGGTGA TCAGCGTCTG
GCGCCTGCCA GCCTGACCAA GCTGATGACT GCCTACATCG CGACCCTGGA AATCCGTCGT
GGCCAGATCG GTGAAAACGA TCCGGTGACC ATCAGTGAAA ACGCCTGGCG CACTGGCGGT
TCGCGGATGT TCATCAAGGT CGGTAGCCAG GTCACGGTCA GCGATCTGCT GCACGGCATT
ATCATCCAGT CGGGTAACGA CGCCAGCGTC GCGATCTCTG AACACATCGC CGGCAGCGAA
GATGCATTTG CCGACATGAT GAACAAGACC GCCGGCGACC TGGGCATGAC CAACAGCCAT
TTCATGAACC CGACCGGTCT GCCGAACCCG GAGCACTATT CGTCGGCGCA CGACATGGCG
ATTCTGGCCC GAGCCATCAT CCACGAAGAC CCGGCTCACT ATGCGATCTA CTCGCAGAAA
GAGTTCTTCT GGAACGGCAT CAAACAGCCT AACCGCAACC TGCTGCTGTG GCGTGACAAG
ACCGTTGACG GTCTGAAAAC CGGTCACACC GACGAAGCCG GCTACTGCAT GGTGTCTTCG
GCCGTCCGTG ACGGCATGCG CCTGATTGCC GTGGTGTTCG GCACCAACAG CGAACAGGCT
CGTGCGGCTG AAACCCAGAA GCTGCTGACC TATGGTTTCC GTTTCTTCGA AACCCAAAAC
TTCTATCAGA AAGGCACCGA GCTGGCTCAG GCAACTGTCT GGAAAGGCAC CGAGCGTCAG
GTCAAGGCCG GTCTGGCTGA AGATCTGAGC ATGACCATGC CCAAAGGCGA CATGAAAAAG
CTGTCCGCCA GCATGACCAT GAACCCGCAA CTGGTTGCGC CAATCGCCAA GGGCGACGTG
ATCGGCAAGG TCGAGGTCAA GAAGGACGAT CAGGTGGTTC ACACCGCCAA TCTGATTGCC
CTTGATGCAG TCGAGGAAGG TGGCATTTTC CGCCGCGTGT GGGATAGCAT CCGCCTGTTC
TTCTACGGCT TGTTCAACTG A
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| Protein sequence | MNITTFAKRL CLLVPLIITP AAWAAEQMTP AAPQLAAKSY VLMDATSGNV LVENNGDQRL
APASLTKLMT AYIATLEIRR GQIGENDPVT ISENAWRTGG SRMFIKVGSQ VTVSDLLHGI
IIQSGNDASV AISEHIAGSE DAFADMMNKT AGDLGMTNSH FMNPTGLPNP EHYSSAHDMA
ILARAIIHED PAHYAIYSQK EFFWNGIKQP NRNLLLWRDK TVDGLKTGHT DEAGYCMVSS
AVRDGMRLIA VVFGTNSEQA RAAETQKLLT YGFRFFETQN FYQKGTELAQ ATVWKGTERQ
VKAGLAEDLS MTMPKGDMKK LSASMTMNPQ LVAPIAKGDV IGKVEVKKDD QVVHTANLIA
LDAVEEGGIF RRVWDSIRLF FYGLFN
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