| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4817 |
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| Symbol | |
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| ID | 1186500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5454870 |
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| End bp | 5456207 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637396137 |
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| Product | HopAJ2 protein |
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| Protein accession | NP_794551 |
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| Protein GI | 28871932 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCTC GTTTTACCCA TCGCCCGCAG CTGCGCCAAC TCATCGCTGC CTCCAGCCTT
ATCGCCCTGG TAGCTTGCGC AGAAAAACCC ACTGCTGCCG ATGCCACGCC CCTTCAAACC
AGTAAAGCGC AAACAAACGC TCCGGCCGTG GCCCCCACGC CAGCACTGGT CGTCGATGAC
ACGCTCACCA TTCAACCCGC CGTCAGCTTC AGCGAATGGC AAGCCGGTTT TCGTGCTCAG
GCGCTCAAGG CAGGCATTCG GGCGGACGTA TTCGACCTGG CGTTTGCCGG TGTCACGCCC
GACATGAGCG TGGTCAAAGC CGACCGCAGC CAGCCCGAGT TCAGCCGCCC GGTCTGGGAA
TACCTGGACG GTGCCATTTC CGCTGTACGC GTGCGCAAGG GTCAGGCGTT GCTGTCGCAG
TACGCTGATG ATCTGCAGAA GATCGAGCAG CAGTACGGCG TGGACCGTCA GGCATTGGTC
GCGGTGTGGG GCATGGAGAG TAATTTCGGA AGCTTTCAGG GTTCGCAATC GGTGATTCGC
TCACTGGCGA CGCTAGCCTA CGAAGGCCGT CGTCCAGGTT TCGCGCAGAG CCAGTTGCTG
GCCGCGCTGG AGATCATCCA GCATGGCGAC ATCACCCCGG ACAAAATGCT CGGCTCGTGG
GCCGGGGCAA TGGGCCAGAC CCAGTTCATC CCGACTACTT ACAACACCCA CGCCGTCGAT
TTTGACGGCG ATGGCCGCCG CGACATCTGG AACACCCCGG CCGACGCCCT CGCCTCCACT
GCGCACTACC TGCAAAGCTC CGGCTGGCAG CGTGGTCAGC CGTGGGGCTT TGAGGTGGTG
CTAGGCTCCG GGTTTGACTA CTCGCTGGCC GATTCGACAA CCCGCAAGAG TCTTGCTGAA
TGGCAGCAAC TGGGCCTCAA GCAACCCGAC GGCTCGGCGA TTCCGGTCGC GGCCAGCCAG
CAGCAGGCGG TCTTGTTGTT GCCCGCGGGT TATCGCGGCC CGGCCTTTCT GGTGCTGGAT
AACTTCCGTG CGATTCTCAA GTACAACAAC TCCACCTCCT ATGCCTTGGC GATCAGCCTG
CTTTCCGACC GTTTCAAGGG CGCAGGGTAC GTGGTCGGTG CCTGGCCACG CGCAGACACG
CCGCTGAGCC GCTCTGAGCG TATCGAGTTG CAAAGCCTGC TCTCGGCCCG CCAATACGAC
GCAGGCGCGC CAGACGGCAT TATCGGCGCC AATACGCGCA AAGCAATCCG CAGCGCACAG
CAATCCTTCG GCTGGCCGGC CGATGGCTAT CCGACGCATG AGTTGCTGGA AGCCCTTCGC
AAGCCTGTGG GGCAGTAA
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| Protein sequence | MPSRFTHRPQ LRQLIAASSL IALVACAEKP TAADATPLQT SKAQTNAPAV APTPALVVDD
TLTIQPAVSF SEWQAGFRAQ ALKAGIRADV FDLAFAGVTP DMSVVKADRS QPEFSRPVWE
YLDGAISAVR VRKGQALLSQ YADDLQKIEQ QYGVDRQALV AVWGMESNFG SFQGSQSVIR
SLATLAYEGR RPGFAQSQLL AALEIIQHGD ITPDKMLGSW AGAMGQTQFI PTTYNTHAVD
FDGDGRRDIW NTPADALAST AHYLQSSGWQ RGQPWGFEVV LGSGFDYSLA DSTTRKSLAE
WQQLGLKQPD GSAIPVAASQ QQAVLLLPAG YRGPAFLVLD NFRAILKYNN STSYALAISL
LSDRFKGAGY VVGAWPRADT PLSRSERIEL QSLLSARQYD AGAPDGIIGA NTRKAIRSAQ
QSFGWPADGY PTHELLEALR KPVGQ
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