Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4805 |
Symbol | |
ID | 1186488 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5444394 |
End bp | 5445416 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396125 |
Product | PhoH-like protein |
Protein accession | NP_794539 |
Protein GI | 28871920 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1702] Phosphate starvation-inducible protein PhoH, predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAACGCAC CCATAGAACC TCATCGCTTC ACCCTCGAGC CATTCGAGGC CCATCGTTTC GCCAACTTGT GCGGGCAACT CGACGAGCAC TTGCGCCTGA TCGAACAACG CCTGGACATC GAGATCCGCA ATCGCGGCAA TCAATTCGAA CTCATCGGCG AAACCACTCA AACCCGATCC GCCGAGAACC TTCTGCGCCG CCTGTACCGG GAAACCAAGG GTACCGAGCT GACGCCGGAC ATGGTCCACC TGTTTCTTCA GGAATCAGGC GTCGACGGCC TGGACAACCA CCCTGCCGCC GAAGTCGGCG TCTCGCTGCG CACCAAAAAG GGCATGATTC GCCCGCGCGG CCTGAATCAG CAGCGTTACG TCAAGGAAGT CCTCAGCAAC GATATCAACT TCGGTATTGG CCCTGCGGGG ACTGGCAAGA CGTACCTGGC GGTTGCCTGC GCGGTCGATG CACTGGAGCG CGAGCAGATT CGCCGCATCC TGCTGGTGCG CCCGGCCGTT GAGGCGGGCG AGAAGCTCGG CTTCCTGCCT GGCGATCTGG CGCAGAAGAT CGACCCGTAC CTGCGCCCGC TGTACGACGC ACTGTACGAG ATGCTCGGCT TCGAATACGT CGCCAAACTG ATCGAGAAAC AGGTCATTGA AGTGGCACCG CTGGCGTACA TGCGCGGACG CACCCTTAAT AACAGCTTCA TCATTCTCGA CGAAAGTCAG AACACTACCG TCGAGCAGAT GAAGATGTTC CTGACCCGTA TCGGCTTTGG CTCCACGGCC GTGATCACCG GCGACATCAC CCAGGTCGAC CTGCCCAAGG GCACGCGGTC GGGGCTGACG CATGTCATCG ATGTGCTCAA GGACGTGCCA GGTATCAGCT TCACGCATTT CAAACCCAAG GATGTGGTTC GCCATCCGCT GGTGCAGCGC ATTGTCGAGG CCTACGAGCG CTTCGATGAC CAGCTCAGCG ACGGCCCGTC GGGCAACAAC GGTTATTCAC GGGACAAGAA TCGCAATGCT TGA
|
Protein sequence | MNAPIEPHRF TLEPFEAHRF ANLCGQLDEH LRLIEQRLDI EIRNRGNQFE LIGETTQTRS AENLLRRLYR ETKGTELTPD MVHLFLQESG VDGLDNHPAA EVGVSLRTKK GMIRPRGLNQ QRYVKEVLSN DINFGIGPAG TGKTYLAVAC AVDALEREQI RRILLVRPAV EAGEKLGFLP GDLAQKIDPY LRPLYDALYE MLGFEYVAKL IEKQVIEVAP LAYMRGRTLN NSFIILDESQ NTTVEQMKMF LTRIGFGSTA VITGDITQVD LPKGTRSGLT HVIDVLKDVP GISFTHFKPK DVVRHPLVQR IVEAYERFDD QLSDGPSGNN GYSRDKNRNA
|
| |