| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4725 |
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| Symbol | |
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| ID | 1186408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5350688 |
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| End bp | 5351665 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637396053 |
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| Product | IS52, transposase |
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| Protein accession | NP_794467 |
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| Protein GI | 28871848 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGAAAA CCTTCTCCGA ACTCGAATAT ACCGGCAAGA AAAAGCAGAC TCGCCGAGAT
CGCTTCCTGG CTGACCTTGA ACAGTTGGTG CCCTGGGCCC AGCTGGAGGC GCAAGTGGCG
CCGTTTTATA GCAACACCGC AGGCAAGCGC GGACGCCCTG CGATAGGGGT GTCGCGCATG
TTGCGCATGT ACGTCGTGCA GCAGTGTTTC GGTTTCTCCG ATGAAGGTTG CGAAGATGCC
GTCTACGACA GCCAGGCCAT CCGCGGTTTT ATGGGTATCG ACCTGGGTCG CGAGTCGGCA
CCGGATGCCA CCACCTTGCT GCGTTTTCGC CGCTTGCTGG AAACCCATCA GCTAACGCGG
CTGCTGTTTG AAACGATTAA CCAGCATCTG GCCAGCCGGG GGCTGCTGCT CAAGGAAGGC
ACTATCGTCG ACGCTACCCT GATCGCCGCG CCGCCCTCGG TCAAGAACCG AGAAGGCAAG
CGTGATCCTG AGATGCATCA GGCCAGGAAA GGCAATCAAT GGCACTTCGG GATGAAGGCC
CACATTGGTG TAGACGCCAC GTCGGGGCTG GTGCACAGCG TAGTAGGGAC GGCCGCTAAC
GTGGCGGATG TCACCCAGGT TGGCCAGTTG CTGCACGGTG ACGAAACCTA TGTTTCGGGT
GACGCTGGAT ACACCGGTGC GGCCAAGCGA CCGGAGCATG CTGAACGGGA CGTTATCTGG
TCGATTGCAG CACGGCCAAG CAGTTACAAG CAGCACGGCG AAGGCAGCGT GCTGTATCGG
GTCAAGCGTA AAATTGAATA TGCCAAGGCG CAACTGCGCG CCAAGGTCGA GCACCCCTTC
CAGGTAATCA AGGTGCGCTT CAATCATCGC AAGGTTCGCT ACCGTGGGCT GGAAAAGAAT
ACAGCGCAGT TGTTCAGTTT GTTTGGGTTG GCCAATCTGA TGCTGGCCAA GCGGTATTTG
CAACAGGCGG CAGGATAA
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| Protein sequence | MQKTFSELEY TGKKKQTRRD RFLADLEQLV PWAQLEAQVA PFYSNTAGKR GRPAIGVSRM
LRMYVVQQCF GFSDEGCEDA VYDSQAIRGF MGIDLGRESA PDATTLLRFR RLLETHQLTR
LLFETINQHL ASRGLLLKEG TIVDATLIAA PPSVKNREGK RDPEMHQARK GNQWHFGMKA
HIGVDATSGL VHSVVGTAAN VADVTQVGQL LHGDETYVSG DAGYTGAAKR PEHAERDVIW
SIAARPSSYK QHGEGSVLYR VKRKIEYAKA QLRAKVEHPF QVIKVRFNHR KVRYRGLEKN
TAQLFSLFGL ANLMLAKRYL QQAAG
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