| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4656 |
|---|
| Symbol | |
|---|
| ID | 1186339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 5259642 |
|---|
| End bp | 5260925 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637395993 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_794407 |
|---|
| Protein GI | 28871788 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGTTCTG AGTTCTCCGC TGCTTCTGCC CCGGTCAAGT TGTCCAGCCA GCCCGGTTTC
GTCAGTTTTA TCCTCTCGCG CCTGATGGCT GTGTTTGCCA TGCAGATTCA GGCAGTGGTG
GTTGCCTGGC AGGTCTATGA CATGACCCGC GAGCCGATGG CGCTGGCGTA TGTCGGCCTT
GCTCAGTTCA TCCCCATGTT ACTGCTGTTG ATGCCTGCCG GGGACCTGAT CGACCGTTAC
AACCGCAAGG TTATCCTGAT GATCAGTTGG GGCGTGCAGG CGGTGTGCGG CGTCATTCTG
TTCGCGTTCT CGGCGCTGAA GCTGCACGAC CTGCGGCTGA TCTACGGCGC GCTGATGCTC
TACGGCTGTG CCCGCGCGTT CACCGGCCCG GCCCTGCAAA GCCTGCTGCC GCAGATTGTC
CCGCGCGACC AACTCGCTTC AGCCATCGCC ACCAACAGCG TGATCATGCG CTGCTCGACC
GTCGGCGGCC CGCTGATCGG CGGTTATCTG TATTGGTTGG GCGGCGCAGA GCTTACGTAT
TCGGTGTGTG TGGCCGCATT CATCGCCGGG ATCCTGTTGC TGGCCCGGGT TGCCACGCCC
TTTGCCGGCA AGCCTGTGGA TCTGGGCTCC AGCGCCTGGG GCCGGTTCAC GGCGGGCATT
GCCTTTATCC GCTCGCGGCC GATCATCCTG GGCACCATTT CACTGGACCT GTTCGCCGTG
CTGCTCGGTG GCGTGGTCGC GCTGCTGCCA ATCTACGCTC ATGAAGTGCT GAACCTGGGC
CCGCAAGGGC TGGGTATGCT GCGCGCTTCG ATGAGCCTGG GCGAACTGGG CGTCGGGATT
TACCTGAGCA TGCGCCCGCT GGACCGCAAT GTCGGCATGA CCATGTTTTT CGCCGTCGGC
CTGTTCGGTG TGGCGAATCT GGTGTTTGCC CTGTCCACGC TGTTCTGGCT GTCGTGCCTG
GCATTGCTGG TCGCGGGCGC GGCGGACATG GTCAGCGTCT ACATCCGCTC GGCGCTGGTA
CAGTTTTCGA CGCCAGACAA CATGCGCGGC CGGGTCAATG CGGTGAACAT GCTGTTTATC
GGTTCCTCCA ACGAGCTGGG CGAATTCCGG GCGGGCACCA GTGCCTCACT GGTCGGCGCA
ATCCCGGCCG CAATCATGGG CGGCGTGTGT ACTCTGGGCG TGGTTGGTGC GTGGATGGCG
GGCTTCAAGT CGCTGCGTCA GGTCGATCGT TTCGCCGATG CGTCGCCGCT TGATGTGTTG
CAGGCGCAGG CGGTGAAAAG CTAG
|
|---|
| Protein sequence | MSSEFSAASA PVKLSSQPGF VSFILSRLMA VFAMQIQAVV VAWQVYDMTR EPMALAYVGL
AQFIPMLLLL MPAGDLIDRY NRKVILMISW GVQAVCGVIL FAFSALKLHD LRLIYGALML
YGCARAFTGP ALQSLLPQIV PRDQLASAIA TNSVIMRCST VGGPLIGGYL YWLGGAELTY
SVCVAAFIAG ILLLARVATP FAGKPVDLGS SAWGRFTAGI AFIRSRPIIL GTISLDLFAV
LLGGVVALLP IYAHEVLNLG PQGLGMLRAS MSLGELGVGI YLSMRPLDRN VGMTMFFAVG
LFGVANLVFA LSTLFWLSCL ALLVAGAADM VSVYIRSALV QFSTPDNMRG RVNAVNMLFI
GSSNELGEFR AGTSASLVGA IPAAIMGGVC TLGVVGAWMA GFKSLRQVDR FADASPLDVL
QAQAVKS
|
|---|
| |