Gene PSPTO_4643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4643 
Symbol 
ID1186326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5246633 
End bp5247610 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content54% 
IMG OID637395980 
ProductISPssy, transposase 
Protein accessionNP_794394 
Protein GI28871775 
COG category[L] Replication, recombination and repair 
COG ID[COG3039] Transposase and inactivated derivatives, IS5 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA TGACCTTCGC CGATGCCGAG TACGCGGGTA AACGTAAGCA TACCCGCCGC 
GAGCGCTTTC TCATCGAGAT GGATCAGGTT GTGCCCTGGA AAGGCTTGAT TGCCCTTATC
GAACCACATT ATCCAAAGGG CGAAGGTGGC CGTCCGGCTT ATCCGCTGAT GGCGATGCTG
CGTATTCACC TGATGCAGAA CTGGTTTGGT TACAGCGATC CGGCGATGGA GGAAGCACTT
TACGAGACAA CGATCCTGCG CCAGTTCGCA GGGTTGAGTC TGGATCGAAT CGCCGATGAA
ACCACGATTC TCAACTTCCG GCGTCTGTTG GAAAAGCATG AGTTGGCAGG CGGGATTTTG
CAGGTCATCA ATGGCTATCT GGGTGATCGA GGTTTGATGC TGCGCCAAGG TACGGTGGTC
GATGCGACGA TCATTCATGC GCCGAGCTCG ACCAAGAACA AGGACGGCAA ACGCGATCCC
GAAATGCATC AGACGAAGAA AGGAAACCAG TATTTCTTCG GCATGAAAGC GCATATCGGC
GTCGATGCCG AGTCGGGTTT AGTCCATAGC CTGGTGGGTA CTGCGGCGAA TGTGGCGGAC
GTGACTCAGG TTGATCAATT GCTACATGGT GAGGAAACCT ATGTCAGCGG TGATGCGGGC
TACACCGGCG TGGACAAGCG TGCGGAGCAT CAGGATCGTC AGATGATCTG GTCAATTGCG
GCCCGCCCAA GCCGTTATAA AAAGCATGGC GAGAAAAGTT TGATCGCACG GGTCTATCGC
AAAATCGAGT TCACGAAAGC CCAGTTACGG GCGAAGGTTG AACATCCGTT TCGCGTGATC
AAGCGCCAGT TTGGTTATAC GAAAGTCCGG TTTCGCGGGC TGGCTAAAAA CACCGCGCAA
CAGGCTACTC TGTTTGCCTT GTCGAACCTT TGGATGGTGC GAAAACGGCT GCTGGCGATG
GGAGAGGTGC GCCTGTAA
 
Protein sequence
MKQMTFADAE YAGKRKHTRR ERFLIEMDQV VPWKGLIALI EPHYPKGEGG RPAYPLMAML 
RIHLMQNWFG YSDPAMEEAL YETTILRQFA GLSLDRIADE TTILNFRRLL EKHELAGGIL
QVINGYLGDR GLMLRQGTVV DATIIHAPSS TKNKDGKRDP EMHQTKKGNQ YFFGMKAHIG
VDAESGLVHS LVGTAANVAD VTQVDQLLHG EETYVSGDAG YTGVDKRAEH QDRQMIWSIA
ARPSRYKKHG EKSLIARVYR KIEFTKAQLR AKVEHPFRVI KRQFGYTKVR FRGLAKNTAQ
QATLFALSNL WMVRKRLLAM GEVRL