Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4633 |
Symbol | |
ID | 1186316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5236578 |
End bp | 5237111 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637395970 |
Product | hypothetical protein |
Protein accession | NP_794384 |
Protein GI | 28871765 |
COG category | [S] Function unknown |
COG ID | [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.53967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAGC CAGCCGCACG TATAACCGAC CCCACCAATT GCCCCATGCC TGGACACGGC ACCAAAGCCA TTGCGTCCGG ATCTCCCAAT GTGTTTTTCG ACGGCCTTGC TGCCGCAACC AAAGGCGATA CCTGCACCTG CGGCAGCATT CTAGATTCCG CCGTTTCGAG TACCGTGTTC ATTAACGGTA AAAATGCCGC GCTGGTCGGG ACTTTTGGCA CCCACGGAGA CATCGTGATT GGTGGCTCGG GCACCGTGAT AATCGGTGAT TCGCACACGC CGGCACCGTT TATACCCCCA CTCCCGATTT TACTGAAAAA AACTTATGGA CATGCTTTCA GCATAGTTGA TAGCGAAACA GGTCAGCCTC TAGCCGGAAG AAACTTCACA GCCACTGTAG ATGGCCAAAA GATTACCGGT GTTACTGATC GCGCCGGAGT AGCCAGCGTC AAAACCTCAA GCAAAGATGC CGCTATTTCT ATTAGCATTG ATTTTATCTC ACCGGCTCGG ACGCTCAGCG AACTCACGGA CTGA
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Protein sequence | MAKPAARITD PTNCPMPGHG TKAIASGSPN VFFDGLAAAT KGDTCTCGSI LDSAVSSTVF INGKNAALVG TFGTHGDIVI GGSGTVIIGD SHTPAPFIPP LPILLKKTYG HAFSIVDSET GQPLAGRNFT ATVDGQKITG VTDRAGVASV KTSSKDAAIS ISIDFISPAR TLSELTD
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