Gene PSPTO_4587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4587 
Symbol 
ID1186270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5183281 
End bp5185134 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content60% 
IMG OID637395926 
Producthypothetical protein 
Protein accessionNP_794338 
Protein GI28871719 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.279648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAC GTCTTGTAAC GCTGGCGCTG TTTGTCTGTG CCCCCTTGTC TGCCGCGCCT 
CATGCCACCG CAGACCGTTT GCAGCAAATG GCCAACGAGC CATTCTGGAT TTCACTGGGC
CACTATGAAG CCGGCAAGCT GGGTGGCTGG CGCAGCTACG TCACAGACCC CAAATTCTTT
CTCGCCGCCG ACGGTGCGCA TGACCCGAAG GCAGAGCTGA GCGCCACGCT GGAGGCGATT
TACGCCCCCG TGACCAACGA GCAAACCCAC GCCCAGTGCG TGTACCCGGC ACGTACCCGC
TGGCTGCGCG ATCAGTTGCG CCTGACTGAC CTGCCAACCC CGGACTGCAA GGAATTCAAG
GCCTGGTACA AGGATGTGGC CCCGGACAGC ACCGTGCTGA TTTTTCCGGC GGCCTACCTC
AACAGCCCGT CCTCAATGTT TGGCCATACG CTGTTGCGCA TCGACCCGGC CAGCGCAAAA
ACCAACAACA CCACACTGTT GAGCTATGCG ATCAACTTCG GTGCCTACAT CGAAGGCATG
GACAACAGCA TTCTGTACGC CTGGAAAGGC CTGGCGGGCG GCTATCCGGG GCTGTTTGCA
CTGGTGCCCT ACCAGGAAAA GCTCTCGGAA TACCGCAGCC TGGAAAACCG TGACCTGTGG
GAGTACCGGC TGAACCTGAC CGCAGAAGAA ACCGGGCGCA TGGTCGAGCA CGTCTGGGAA
TTGAAACAGA TCCGTTTCAG CTACTTTTTC TTTGATGAAA ACTGCTCCTA TCGCCTGCTG
GAATTGTTGC AGGTCGCCCG ACCGGGGCTG CACCTGACCG AACAGTTCGG CCTGACCGCA
ATCCCCACCG ACACCGTAAA AGCCATCAAG GCCGCAGGGT TGGTGGAAAA GATCGACTAT
CGACCGTCCC GCGAGCGTGA ATTGCTCAGC CGTGCAGCGC CCCTCGATGC CGACGAGCAG
CAGTGGGTAT TAAAAGTCAG CGCCGATCAG AAGCACTTGC AGGACAGCCA GTATCTGGCC
CAGCCAAAAG AGCGCCGCGC GCTGATTCAG GATGCGGCCT ATCGCCTTGA ACGTTATCGC
GCCAACGGCC TTGAACGCGA CACGCAGCGC TCGCAACGCA GCTTCGAGCT GTTGCAGGCC
ATCAACCAGA ACCCTCCGCC ACAACTGGAT ATACCGCGCC CCGGCTTGCC GGAAGAAGGC
CATGAGTCAC GCACCTGGCA GTTGGGCGCG GGCACCCGCG GCGACAAGGC CTTCGCCGAA
TACGGCCTGC GCATGGCCTA TCACGACCTG AACGACAACG CCTATGGCTT CCCGCTGGGC
GCACAGATCG AGATTCTGCA GCTCAAGGTG CGGCAATACG AAGGCAACGA TTGGCAAGTG
CAGCAATTGG ATCTGGCCAC CATTCGTTCG CTAACGCCGC GTACCGAACT GCTGAAACCC
TGGTCATGGC AAGTCACTGG CGGGCTGGAG CGTGTGTTAG GCAAGCATGG CGACGAAAAC
CTCGTCAGCC ATGTGAACGG TGGCGGTGGC GGAACCTGGC AACTGGGTGA CGAAGTGCTG
GGCTTCGCGC TGGGCACGGT GCGTGTCGAG CACAACAATG ATTTTGCCGA GTTCATTTCC
CCTGCCGCTG GCTTCAACAC AGGCGTGCTG TGGCGCAACC CGCTGGGCAA CCTGAGCCTG
GAAGCCAAAG GCGACTACTT CACCAACGGC GAAGTGCGTC GCAGTGTCAG CCTCAATCAG
CAGTGGGAGC TGTCGCGCAA CCTGGGCCTG CGCCTGAGCG CCCAACGCGA ATTCAGCCAG
ATGAGCTCGC CACAGAATGA AGTGATGCTT GAGGTGAAGT GGTATCACTA CTGA
 
Protein sequence
MLKRLVTLAL FVCAPLSAAP HATADRLQQM ANEPFWISLG HYEAGKLGGW RSYVTDPKFF 
LAADGAHDPK AELSATLEAI YAPVTNEQTH AQCVYPARTR WLRDQLRLTD LPTPDCKEFK
AWYKDVAPDS TVLIFPAAYL NSPSSMFGHT LLRIDPASAK TNNTTLLSYA INFGAYIEGM
DNSILYAWKG LAGGYPGLFA LVPYQEKLSE YRSLENRDLW EYRLNLTAEE TGRMVEHVWE
LKQIRFSYFF FDENCSYRLL ELLQVARPGL HLTEQFGLTA IPTDTVKAIK AAGLVEKIDY
RPSRERELLS RAAPLDADEQ QWVLKVSADQ KHLQDSQYLA QPKERRALIQ DAAYRLERYR
ANGLERDTQR SQRSFELLQA INQNPPPQLD IPRPGLPEEG HESRTWQLGA GTRGDKAFAE
YGLRMAYHDL NDNAYGFPLG AQIEILQLKV RQYEGNDWQV QQLDLATIRS LTPRTELLKP
WSWQVTGGLE RVLGKHGDEN LVSHVNGGGG GTWQLGDEVL GFALGTVRVE HNNDFAEFIS
PAAGFNTGVL WRNPLGNLSL EAKGDYFTNG EVRRSVSLNQ QWELSRNLGL RLSAQREFSQ
MSSPQNEVML EVKWYHY