Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4587 |
Symbol | |
ID | 1186270 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5183281 |
End bp | 5185134 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395926 |
Product | hypothetical protein |
Protein accession | NP_794338 |
Protein GI | 28871719 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.279648 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCAAAC GTCTTGTAAC GCTGGCGCTG TTTGTCTGTG CCCCCTTGTC TGCCGCGCCT CATGCCACCG CAGACCGTTT GCAGCAAATG GCCAACGAGC CATTCTGGAT TTCACTGGGC CACTATGAAG CCGGCAAGCT GGGTGGCTGG CGCAGCTACG TCACAGACCC CAAATTCTTT CTCGCCGCCG ACGGTGCGCA TGACCCGAAG GCAGAGCTGA GCGCCACGCT GGAGGCGATT TACGCCCCCG TGACCAACGA GCAAACCCAC GCCCAGTGCG TGTACCCGGC ACGTACCCGC TGGCTGCGCG ATCAGTTGCG CCTGACTGAC CTGCCAACCC CGGACTGCAA GGAATTCAAG GCCTGGTACA AGGATGTGGC CCCGGACAGC ACCGTGCTGA TTTTTCCGGC GGCCTACCTC AACAGCCCGT CCTCAATGTT TGGCCATACG CTGTTGCGCA TCGACCCGGC CAGCGCAAAA ACCAACAACA CCACACTGTT GAGCTATGCG ATCAACTTCG GTGCCTACAT CGAAGGCATG GACAACAGCA TTCTGTACGC CTGGAAAGGC CTGGCGGGCG GCTATCCGGG GCTGTTTGCA CTGGTGCCCT ACCAGGAAAA GCTCTCGGAA TACCGCAGCC TGGAAAACCG TGACCTGTGG GAGTACCGGC TGAACCTGAC CGCAGAAGAA ACCGGGCGCA TGGTCGAGCA CGTCTGGGAA TTGAAACAGA TCCGTTTCAG CTACTTTTTC TTTGATGAAA ACTGCTCCTA TCGCCTGCTG GAATTGTTGC AGGTCGCCCG ACCGGGGCTG CACCTGACCG AACAGTTCGG CCTGACCGCA ATCCCCACCG ACACCGTAAA AGCCATCAAG GCCGCAGGGT TGGTGGAAAA GATCGACTAT CGACCGTCCC GCGAGCGTGA ATTGCTCAGC CGTGCAGCGC CCCTCGATGC CGACGAGCAG CAGTGGGTAT TAAAAGTCAG CGCCGATCAG AAGCACTTGC AGGACAGCCA GTATCTGGCC CAGCCAAAAG AGCGCCGCGC GCTGATTCAG GATGCGGCCT ATCGCCTTGA ACGTTATCGC GCCAACGGCC TTGAACGCGA CACGCAGCGC TCGCAACGCA GCTTCGAGCT GTTGCAGGCC ATCAACCAGA ACCCTCCGCC ACAACTGGAT ATACCGCGCC CCGGCTTGCC GGAAGAAGGC CATGAGTCAC GCACCTGGCA GTTGGGCGCG GGCACCCGCG GCGACAAGGC CTTCGCCGAA TACGGCCTGC GCATGGCCTA TCACGACCTG AACGACAACG CCTATGGCTT CCCGCTGGGC GCACAGATCG AGATTCTGCA GCTCAAGGTG CGGCAATACG AAGGCAACGA TTGGCAAGTG CAGCAATTGG ATCTGGCCAC CATTCGTTCG CTAACGCCGC GTACCGAACT GCTGAAACCC TGGTCATGGC AAGTCACTGG CGGGCTGGAG CGTGTGTTAG GCAAGCATGG CGACGAAAAC CTCGTCAGCC ATGTGAACGG TGGCGGTGGC GGAACCTGGC AACTGGGTGA CGAAGTGCTG GGCTTCGCGC TGGGCACGGT GCGTGTCGAG CACAACAATG ATTTTGCCGA GTTCATTTCC CCTGCCGCTG GCTTCAACAC AGGCGTGCTG TGGCGCAACC CGCTGGGCAA CCTGAGCCTG GAAGCCAAAG GCGACTACTT CACCAACGGC GAAGTGCGTC GCAGTGTCAG CCTCAATCAG CAGTGGGAGC TGTCGCGCAA CCTGGGCCTG CGCCTGAGCG CCCAACGCGA ATTCAGCCAG ATGAGCTCGC CACAGAATGA AGTGATGCTT GAGGTGAAGT GGTATCACTA CTGA
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Protein sequence | MLKRLVTLAL FVCAPLSAAP HATADRLQQM ANEPFWISLG HYEAGKLGGW RSYVTDPKFF LAADGAHDPK AELSATLEAI YAPVTNEQTH AQCVYPARTR WLRDQLRLTD LPTPDCKEFK AWYKDVAPDS TVLIFPAAYL NSPSSMFGHT LLRIDPASAK TNNTTLLSYA INFGAYIEGM DNSILYAWKG LAGGYPGLFA LVPYQEKLSE YRSLENRDLW EYRLNLTAEE TGRMVEHVWE LKQIRFSYFF FDENCSYRLL ELLQVARPGL HLTEQFGLTA IPTDTVKAIK AAGLVEKIDY RPSRERELLS RAAPLDADEQ QWVLKVSADQ KHLQDSQYLA QPKERRALIQ DAAYRLERYR ANGLERDTQR SQRSFELLQA INQNPPPQLD IPRPGLPEEG HESRTWQLGA GTRGDKAFAE YGLRMAYHDL NDNAYGFPLG AQIEILQLKV RQYEGNDWQV QQLDLATIRS LTPRTELLKP WSWQVTGGLE RVLGKHGDEN LVSHVNGGGG GTWQLGDEVL GFALGTVRVE HNNDFAEFIS PAAGFNTGVL WRNPLGNLSL EAKGDYFTNG EVRRSVSLNQ QWELSRNLGL RLSAQREFSQ MSSPQNEVML EVKWYHY
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