| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4548 |
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| Symbol | |
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| ID | 1186231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5137584 |
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| End bp | 5138969 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395889 |
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| Product | MFS transporter, phthalate permease family |
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| Protein accession | NP_794301 |
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| Protein GI | 28871682 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0771862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAAGT CCAAGCCGAC GCACGTCCGC TATTTGATTT TGTTGATGCT GTTTCTGGTC
ACCACGATCA ACTACGCCGA CCGTGCCACC ATCGCAATCG CTGGTTCCAG CATCCAGAAA
GACCTCGGCA TCAGTGCTGT TACTCTGGGT TATATCTTCT CTGCATTCGG CTGGGCCTAC
GTGGCCGGTC AGATTCCCGG TGGCTGGCTG CTCGACCGGT TCGGGTCGAA AAAAGTCTAC
GCCATGAGCA TTTTCACCTG GTCGCTGTTC ACCTTGCTGC AGGGCTATGT GGGCGAGTTC
GGTGTCTCCA CGGCGATCGT TGCGCTGTTC ATGCTGCGCT TTCTTGTCGG GCTGGCCGAA
GCGCCTTCCT TCCCGGGTAA CGCGCGCATC GTGGCCGCCT GGTTTCCCAC CGCTGAGCGC
GGTACAGCTT CGGCGATTTT CAACTCGGCG CAGTACTTTG CCACCGTGCT GTTCGCACCG
CTGATGGGCT GGATCGTTTA CACCTACGGC TGGCAGCACG TGTTCGTGGT CATGGGCGCG
ATCGGTATCG TGTTCTCGAT GATCTGGATG AAGGTCATTT ATGGCCCGCG CAATCACCCG
ATGATCAACG AGGCCGAGTT CGAGCACATC TCCAGCAATG GTGCGCTGGT CGATCTGGAT
CAGGACAAGG GCAAAGGCAA GGAAAAAGCC GCCAGCAGCG GACCGAAGTG GGACTACATT
CGCCAGTTGC TGACCAACCG CATGATGCTC GGCATCTACC TGAGCCAGTA CTGCATCAAC
GGTATTACCT ACTTCTTCCT GACCTGGTTC CCGGTGTACC TGGTTCAGGA GCGCGGCATG
ACCATCCTCA AGGCTGGCAT CATCGCCTCC CTGCCAGCCA TCTGCGGCTT CATCGGTGGC
GTACTGGGCG GGGTCATTTC CGACTACTTG CTGCGCAAAG GCCACTCGCT GACCTTCGCC
CGCAAGGCAC CGATCATCGG CGGCCTGCTG CTCTCGACCT CGATCGTGAC CTGCAACTAT
GTGGACGTGG AATGGGTGGT CGTGGGCTTC ATGGCCCTGG CATTCTTCGG CAAAGGCGTG
GGCGCACTGG GCTGGGCTGT GATGTCCGAT GTTTCGCCCA AGCAGATTGC CGGTTTGAGT
GGCGGCCTGT TCAACACCTT CGGTAACGTT GCATCGATCA CCACCCCGAT CGTGATTGGT
TACATCATCA GCAGCACCGG CTCGTTCAAA TGGGCGCTGG TGTTCGTGGG CGCCAATGCG
CTGCTGGCAG TGATCAGTTA CATTTTCATC GTGGGTGAAA TCAAGCGTGT GGAATTGAAA
GAGCCGCCTG CCAAGGGGCC ATTGCTGAAC GACTCGGTCA GCGACCTTTC CGAAGCAAAA
TCCTGA
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| Protein sequence | MQKSKPTHVR YLILLMLFLV TTINYADRAT IAIAGSSIQK DLGISAVTLG YIFSAFGWAY
VAGQIPGGWL LDRFGSKKVY AMSIFTWSLF TLLQGYVGEF GVSTAIVALF MLRFLVGLAE
APSFPGNARI VAAWFPTAER GTASAIFNSA QYFATVLFAP LMGWIVYTYG WQHVFVVMGA
IGIVFSMIWM KVIYGPRNHP MINEAEFEHI SSNGALVDLD QDKGKGKEKA ASSGPKWDYI
RQLLTNRMML GIYLSQYCIN GITYFFLTWF PVYLVQERGM TILKAGIIAS LPAICGFIGG
VLGGVISDYL LRKGHSLTFA RKAPIIGGLL LSTSIVTCNY VDVEWVVVGF MALAFFGKGV
GALGWAVMSD VSPKQIAGLS GGLFNTFGNV ASITTPIVIG YIISSTGSFK WALVFVGANA
LLAVISYIFI VGEIKRVELK EPPAKGPLLN DSVSDLSEAK S
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