| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4540 |
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| Symbol | |
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| ID | 1186223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5127919 |
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| End bp | 5128869 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395881 |
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| Product | proline iminopeptidase, putative |
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| Protein accession | NP_794293 |
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| Protein GI | 28871674 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | [TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.999347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATA TGGCAGACAT GACGATCAAG GAAGGTTTTG CGCCCTTTGG CGACTATCAA
ACGTGGTATC GCATCACCGG CGACCTGCGT GGCGGCGGCA CACCGCTGGT CATCCTGCAC
GGCGGCCCTG GCTGTACCCA TGATTACGTG GACTCGTTCA AGGACATCGC CAATACCGGT
CGCGCGGTGA TCCACTACGA TCAACTGGGC AACGGAAAGT CGACCCATCT GCCGGACATG
GGCAGCGAGT TCTGGACAGT CGATCTGTTC CTGAGCGAGC TGGACAACCT GCTTGAGTAT
CTGGAGATCG CCGACGACTA CGCGCTGCTG GGTCAATCCT GGGGTGGCAT GCTGGCGTCG
GAACACGCCG TACTTCAGCC GACAGGCCTG CAGGCACTGA TCATCGCCAA CTCGCCCGCA
GACATGCACA CGTGGGTCAG CGAAGCCAAT CGCCTGCGCG AGGAGCTGCC CGACGACGTT
CAGGCCACGT TACTCAAGCA CGAAGAGGCA GGCACTTTGA CTGACCCGGC GTACCTGACA
GCGTCTCGGG TATTCTACGA CCGCCATGTC TGCCGCATCA CGCCCTGGCC AGTTGAGGTA
GAACGTACAT TCCACCAGAT CGACGAAGAT CCGACGGTGT ATCGCGCGAT GAACGGCCCC
ACCGAATTTC ACGTTATCGG CACGATGAAA GACTGGAGCA TTGTCGACCG CCTGTCGAAC
ATCAACGTCC CGACCCTGGT GATTTCAGGG TTTTACGACG AGGCCACTCC ACTGGTGATT
CAACCTTACG TAGATAACAT CCCTGACGTT CGCCAGTCGG TTTTCCAGGA ATCCAGCCAC
ATGCCCCACG TAGAAGAACG CATGGCATGC ATGGGCCGCG TGGCAGATTT TCTTGACGAG
GTCGCCACCT CAGGCAAAGC GTTGCCAGGC GTCAAAGCCC GTTTTGGATG A
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| Protein sequence | MADMADMTIK EGFAPFGDYQ TWYRITGDLR GGGTPLVILH GGPGCTHDYV DSFKDIANTG
RAVIHYDQLG NGKSTHLPDM GSEFWTVDLF LSELDNLLEY LEIADDYALL GQSWGGMLAS
EHAVLQPTGL QALIIANSPA DMHTWVSEAN RLREELPDDV QATLLKHEEA GTLTDPAYLT
ASRVFYDRHV CRITPWPVEV ERTFHQIDED PTVYRAMNGP TEFHVIGTMK DWSIVDRLSN
INVPTLVISG FYDEATPLVI QPYVDNIPDV RQSVFQESSH MPHVEERMAC MGRVADFLDE
VATSGKALPG VKARFG
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