| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4502 |
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| Symbol | carA |
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| ID | 1186185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5072095 |
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| End bp | 5073231 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395843 |
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| Product | carbamoyl-phosphate synthase, small subunit |
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| Protein accession | NP_794255 |
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| Protein GI | 28871636 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.723109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGACTAAGC CAGCCATACT CGCCCTTGCT GATGGCAGCA TTTTTCGCGG CGAAGCCATT
GGAGCCGACG GTCAAACCGT TGGTGAGGTG GTGTTTAACA CCGCAATGAC AGGCTATCAG
GAAATTCTTA CCGATCCTTC CTACGCCCAG CAGATCGTTA CCCTGACTTA CCCGCACATC
GGCAACACCG GTACTACACC TGAAGACGCC GAGTCGGATC GTGTCTGGTC AGCGGGTCTG
GTCATCCGTG ACCTGCCGCT GGTTGCCAGT AACTGGCGCA ACAAGATGTC CCTTGGTGAT
TACCTGAAAG CCAATAATGT CGTTGCCATC GCTGGCATCG ACACGCGTCG CCTGACCCGC
ATTCTGCGTG AGAAAGGCGC CCAGAACGGT TGCATCATGG CAGGGGACAA CATTTCCGAA
GAGGCAGCCA TCGCCGCCGC TCGCGGGTTC CCTGGCCTCA AGGGCATGGA CCTGGCGAAG
GAAGTCAGCA CCAAGGACAC CTACGAGTGG CGCCACAGTG TCTGGAACCT GCAGACCGAC
AGCCACCCCG AAATCGCCGC TTCCGAGCTG CCTTATCACG TGGTTGCCTA CGATTACGGC
GTCAAGGTCA ACATCCTGCG TATGCTGGTC GAGCGCGGTT GCCGGGTGAC GGTAGTGCCT
GCGCAAACGC CTGCCAGCGA AGTGCTTGCC TACAAGCCGG ACGGTGTTTT CCTGTCCAAC
GGCCCTGGCG ACCCTGAGCC ATGCGACTAC GCCATCAAGG CGATCAAGCA AGTGCTGGAA
ACCGAAGTGC CAGTATTCGG CATCTGCCTT GGTCACCAGT TGCTGGCGCT GGCTGCGGGT
GCCAAGACCG TGAAAATGGG CCATGGCCAC CACGGTGCAA ACCACCCGGT TCAGGATCTG
GACACCGGCG TTGTAATGAT CACCAGTCAG AACCACGGTT TTGCGGTTGA TGAATCGACG
TTGCCGGGCA ACGTTCGCGC TATCCACAAG TCGCTGTTCG ACGGCACCCT GCAAGGTATC
GAGCTGACTG ACAAGAGCGC GTTCAGCTTC CAGGGTCACC CTGAAGCAAG CCCAGGCCCG
AACGATGTAG CGCCCCTGTT TGACCGCTTT ATCGACGCCA TGGCCAAGCG ACGCTGA
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| Protein sequence | MTKPAILALA DGSIFRGEAI GADGQTVGEV VFNTAMTGYQ EILTDPSYAQ QIVTLTYPHI
GNTGTTPEDA ESDRVWSAGL VIRDLPLVAS NWRNKMSLGD YLKANNVVAI AGIDTRRLTR
ILREKGAQNG CIMAGDNISE EAAIAAARGF PGLKGMDLAK EVSTKDTYEW RHSVWNLQTD
SHPEIAASEL PYHVVAYDYG VKVNILRMLV ERGCRVTVVP AQTPASEVLA YKPDGVFLSN
GPGDPEPCDY AIKAIKQVLE TEVPVFGICL GHQLLALAAG AKTVKMGHGH HGANHPVQDL
DTGVVMITSQ NHGFAVDEST LPGNVRAIHK SLFDGTLQGI ELTDKSAFSF QGHPEASPGP
NDVAPLFDRF IDAMAKRR
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