Gene PSPTO_4500 details

Gene Information

• Locus tag: PSPTO_4500
• Symbol: greA
• ID: 1186183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5068265
• End bp: 5068741
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 637395841
• Product: transcription elongation factor GreA
• Protein accession: NP_794253
• Protein GI: 28871634
• COG category: [K] Transcription
• COG ID: [COG0782] Transcription elongation factor
• TIGRFAM ID: [TIGR01462] transcription elongation factor GreA

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAAT ACCCGATGAC CGTTCAGGGC GCTCGCGCCC TGGAAGAAGA GCTGACTCAC 
CTGACCAAGG TGATCCGTCC CAAATTGAGC CAGGACATTG GTACTGCGCG CGAGCTGGGC 
GACCTCAAGG AAAACGCTGA ATACCATGCT GCCCGCGAGC AGCAGGGTAT GGTTGAAGCG 
CGTATTCGTG ATATCGAAGG CCGTATGCAG AACGCGGTGG TGATCGACGT TACGACTATT 
GCGCACACTG GCAAGGTGAT TTTCGGCACG ACAGTCGAAA TCGCCAACGT CGAGACCGAC 
GAAAGCGTTG TTTACCAGAT CGTGGGTGAG GACGAGGCGG ATATCAAGAA GGGCAAGATT 
TCAGTGGGTT CGCCCATTGC TCGCGCCTTG ATTGCCAAGG AAGAAGGTGA CGTCGTCGTG 
GTGAAAACGC CGAGTGGCGT TATCGAATAC GAAATCATCG AAGTGCGTCA TATCTGA 

 

Protein sequence

MIKYPMTVQG ARALEEELTH LTKVIRPKLS QDIGTARELG DLKENAEYHA AREQQGMVEA 
RIRDIEGRMQ NAVVIDVTTI AHTGKVIFGT TVEIANVETD ESVVYQIVGE DEADIKKGKI 
SVGSPIARAL IAKEEGDVVV VKTPSGVIEY EIIEVRHI