Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4475 |
Symbol | gatB |
ID | 1186156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5039359 |
End bp | 5040804 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637395815 |
Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
Protein accession | NP_794229 |
Protein GI | 28871610 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAATGGG AAGTCGTCAT CGGGCTTGAG ATTCACACTC AGCTTTCGAC CCAATCAAAG ATTTTTTCCG GCAGCGCCAC CACGTTCGGC TCCGAGCCCA ACACCCAGGC CTGCCTTGTC GATCTGGGCA TGCCGGGCGT GCTGCCAGTG CTGAACAAGG AAGCCGTGCG CATGGCCGTC AAGTTCGGCC TGGCGGTAGA TGCCGAAATC GGTCAGCACA ACGTGTTCGC CCGCAAAAAC TATTTTTACC CGGACCTGCC CAAGGGCTAT CAGATCAGCC AGATGGAGCT GCCGATTGTC GGCAAGGGCC ACCTGGACAT TCCCCTGGAG GACGGCACGG TCAAACGCGT CGGCATCACT CGCGCGCACC TTGAAGAAGA CGCTGGCAAA AGTCTGCATG AAGACTTCCA GGGCATGACC GGGATCGACC TGAACCGTGC CGGCACGCCG CTGCTGGAGA TCGTTTCCGA GCCGGACATG CGCAGCGCAA AAGAAGCCGT GGCCTACGTC AAGGCCATCC ACGCGATCGT TCGCTACCTG GGTATCTGCG ACGGCAACAT GGCCGAGGGC TCGCTGCGTT GCGACTGCAA CGTGTCGATC CGCCCCAAGG GCCAGGTCGA GTTCGGTACT CGCTGCGAGA TCAAGAACGT CAACTCGTTT CGCTTCATCG AAAAAGCGAT CAACAGCGAG ATTCAGCGCC AGATCGACCT GATCGAAGAC GGCGGCAAGG TTATCCAGCA GACACGTCTG TACGACCCGA ACACCAACGA AACCCGCGCC ATGCGCAGCA AGGAAGAAGC CAACGACTAC CGTTACTTCC CTGACCCAGA CCTGTTGCCG GTGATCATCG AAGACTCGTT CATCGAAGAA ACCCGCGCCA CACTGCCGGA ACTGCCACCG CAGAAACGCG AACGCTTCCA GAGCCAGTTC GGCCTGTCGA CGTACGACGC CAGCGTGCTG GCCTCCAGCC GCGAGCAGGC CGACTACTTT GAAAAAGTGG TCAGCATCAG CGGCGACGCC AAGCTGGCCG CCAACTGGGT CATGGTCGAA CTGGGCAGCC TGTTGAACAA ACAGGGGGTC GAAATCGACC AGTCGCCGGT CAGCGCCGAA CAACTGGGCG GCATGCTCAA GCGCATCACT GACAACACCA TTTCGGGCAA GATCGCCAAA ATGGTTTTTG AAGCGATGGC CAATGGTGAA GGCAGCGCCG ATGAAGTGAT CGAGAAGCGC GGCCTGAAAC AGGTGACCGA CAGCGGTGCC ATCGAATCGA TGCTCGACGA AGTACTGGCT GCCAACGCAG AACAGGTCGA ACAGTACCGT GCAGCTGATG AAGCCAAGCG CGGCAAGATG TTCGGTTTCT TCGTCGGCCA GGCCATGAAA GCCTCCAAAG GCAAGGCCAA CCCACAGCAG GTCAACGAAC TGCTGAAGGC CAAACTGGAG GGTTAA
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Protein sequence | MQWEVVIGLE IHTQLSTQSK IFSGSATTFG SEPNTQACLV DLGMPGVLPV LNKEAVRMAV KFGLAVDAEI GQHNVFARKN YFYPDLPKGY QISQMELPIV GKGHLDIPLE DGTVKRVGIT RAHLEEDAGK SLHEDFQGMT GIDLNRAGTP LLEIVSEPDM RSAKEAVAYV KAIHAIVRYL GICDGNMAEG SLRCDCNVSI RPKGQVEFGT RCEIKNVNSF RFIEKAINSE IQRQIDLIED GGKVIQQTRL YDPNTNETRA MRSKEEANDY RYFPDPDLLP VIIEDSFIEE TRATLPELPP QKRERFQSQF GLSTYDASVL ASSREQADYF EKVVSISGDA KLAANWVMVE LGSLLNKQGV EIDQSPVSAE QLGGMLKRIT DNTISGKIAK MVFEAMANGE GSADEVIEKR GLKQVTDSGA IESMLDEVLA ANAEQVEQYR AADEAKRGKM FGFFVGQAMK ASKGKANPQQ VNELLKAKLE G
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