| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4452 |
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| Symbol | |
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| ID | 1186133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 5016321 |
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| End bp | 5017046 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395792 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | NP_794206 |
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| Protein GI | 28871587 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAACGC TCAAAGCCCA GCATCTGGCT AAAAGCTACA AGAGCCGACA GGTCGTACGC
GATGTGAGTA TCTCCATCGA CAGCGGCCAG ATCGTCGGCT TGCTGGGCCC CAACGGCGCC
GGCAAGACCA CGTGCTTCTA CATGATCGTG GGTCTGGTCC AGGCTGATCA GGGTCGCGTG
CTGATTGACG ATCTGGACAT CAGCCACCAG CCCATGCACG GCCGCGCACG CGCCGGTATT
GGCTATCTGC CGCAGGAAGC CTCGATCTTC CGCAAGCTGT CGGTGTCCGA CAACATCATG
GCGATTCTCG AAACCCGCAA GGAACTCGAC GCCGGGGCTC GCCGCAAGGA GCTGGAAAGT
CTCCTGCAGG AGTTTCACAT CACCCACATT CGCGACAACC TGGGCATGAG CCTGTCGGGT
GGTGAGCGTC GCCGTGTGGA GATTGCCCGT GCGCTGGCCA CGTCGCCCAA GTTCATCCTG
CTGGACGAAC CGTTCGCAGG CGTCGACCCG ATTTCGGTGG GTGATATCAA GCAGATCATT
CACCATCTCA AGGCCAAGGG TATCGGCGTA CTGATCACAG ACCACAACGT CCGTGAAACG
CTGGACATCT GCGAAACCGC CTACATCGTC AACGATGGGC AACTGATCGC AGAAGGCGAC
TCCGAGACCA TTCTGGCGAA TCAACTGGTG AAAGAGGTCT ACCTCGGTCA CGAATTCCGC
CTTTAA
|
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| Protein sequence | MATLKAQHLA KSYKSRQVVR DVSISIDSGQ IVGLLGPNGA GKTTCFYMIV GLVQADQGRV
LIDDLDISHQ PMHGRARAGI GYLPQEASIF RKLSVSDNIM AILETRKELD AGARRKELES
LLQEFHITHI RDNLGMSLSG GERRRVEIAR ALATSPKFIL LDEPFAGVDP ISVGDIKQII
HHLKAKGIGV LITDHNVRET LDICETAYIV NDGQLIAEGD SETILANQLV KEVYLGHEFR
L
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