Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4425 |
Symbol | rpsI |
ID | 1186106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4992922 |
End bp | 4993314 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395765 |
Product | ribosomal protein S9 |
Protein accession | NP_794179 |
Protein GI | 28871560 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0103] Ribosomal protein S9 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.146621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGCGA CTCAAAATTA CGGCACTGGC CGTCGCAAGA CCGCAACCGC ACGCGTTTTC CTGCGTCCGG GTACTGGTAA CATCTCGATC AACAACCGCT CCCTGGACAA TTTCTTCGGC CGCGAGACTG CCCGCATGGT AGTTCGTCAG CCGCTGGAAC TGACCGAGAC AGTTGAAAAG TTCGACATCT ACGTCACCGT AATCGGTGGC GGTGTAAGTG GTCAGGCTGG CGCAATCCGC CACGGTATCA CTCGCGCTCT GATGCAGTAC GACGAGACGC TGCGCGGCGC TCTGCGTAAA GCAGGCTTCG TGACTCGCGA TGCTCGTGAA GTTGAACGTA AGAAAGTCGG TCTGCGTAAA GCGCGTAAGC GTCCGCAGTA CTCGAAGCGT TAA
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Protein sequence | MSATQNYGTG RRKTATARVF LRPGTGNISI NNRSLDNFFG RETARMVVRQ PLELTETVEK FDIYVTVIGG GVSGQAGAIR HGITRALMQY DETLRGALRK AGFVTRDARE VERKKVGLRK ARKRPQYSKR
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