Gene PSPTO_4411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4411 
SymbolmraY 
ID1186092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4978773 
End bp4979855 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content58% 
IMG OID637395751 
Productphospho-N-acetylmuramoyl-pentapeptide- transferase 
Protein accessionNP_794165 
Protein GI28871546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase 
TIGRFAM ID[TIGR00445] phospho-N-acetylmuramoyl-pentapeptide-transferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.1751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTGC TGTTGGCCGA GTTCTTACAA CAGTTCTACA AAGGCTTTGC GGTCTTTCAG 
TACCTGTCTC TGCGCGGGAT CCTTGGCGTG CTCACTGCGC TGACGTTGTC GCTGTGCCTG
GGGCCGTGGA TGATCCGCAC CCTGCAGATG CGCCAGATCG GCCAGTCGGT CCGTAACGAT
GGTCCGCAAT CGCACTTGTC CAAGTCCGGT ACGCCGACCA TGGGCGGTGC GCTGATCCTC
TCGTCCATCG GTATCAGCAC CTTGCTCTGG GCTGATTTGA GCAACCGTTA CGTCTGGGTT
GTGTTGCTGG TGACCTTTCT GTTCGGTGCC ATCGGCTGGG TTGATGACTA CCGCAAGGTC
ATTGAAAAGA ATTCCCGTGG TCTGCCGAGT CGCTGGAAGT ATTTCTGGCA GTCGGTGTTC
GGCCTTTGCG CGGCAATCTT TCTGTACACG ACTGCGCCAT CGGCGACCGA AACCACATTG
ATCGTGCCGA TGCTCAAGGA TGTGCGCATT CCGCTCGGCA TCGGCTTCAT CGTGCTGACG
TACTTTGTGA TTGTCGGTTC CAGCAACGCA GTCAACCTGA CTGACGGCCT GGACGGGCTG
GCGATCATGC CGACGGTGAT GGTCGGCGGT GCGCTGGGCA TCTTCTGCTA CCTGTCGGGT
AACGTGAAAT TCGCGGAATA CCTGCTGATT CCCTACGTGC CGGGGGCGGG TGAGCTGATT
GTCTTCTCGG GTGCACTGAT TGGTGCGGGG CTCGGGTTTC TCTGGTTCAA CACCTATCCG
GCTCAGGTGT TCATGGGCGA CGTCGGTGCG CTGGCACTGG GCGCTGCGCT GGGCACCATG
GCCGTGATCG TGCGTCAGGA AATGGTCCTG TTCATCATGG GCGGCGTGTT CGTGATGGAA
ACCCTTTCAG TGGTCATTCA GGTTGCGTCT TTCAAACTGA CCGGCCGCCG CGTATTCCGC
ATGGCGCCGA TTCACCACCA CTTTGAACTC AAAGGCTGGC CCGAGCCACG CGTGATCGTC
CGTTTCTGGA TCATCACCGT GATTCTGGTG CTCATCGGCC TTGCCACACT GAAACTGAGG
TAG
 
Protein sequence
MLLLLAEFLQ QFYKGFAVFQ YLSLRGILGV LTALTLSLCL GPWMIRTLQM RQIGQSVRND 
GPQSHLSKSG TPTMGGALIL SSIGISTLLW ADLSNRYVWV VLLVTFLFGA IGWVDDYRKV
IEKNSRGLPS RWKYFWQSVF GLCAAIFLYT TAPSATETTL IVPMLKDVRI PLGIGFIVLT
YFVIVGSSNA VNLTDGLDGL AIMPTVMVGG ALGIFCYLSG NVKFAEYLLI PYVPGAGELI
VFSGALIGAG LGFLWFNTYP AQVFMGDVGA LALGAALGTM AVIVRQEMVL FIMGGVFVME
TLSVVIQVAS FKLTGRRVFR MAPIHHHFEL KGWPEPRVIV RFWIITVILV LIGLATLKLR