| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4405 |
|---|
| Symbol | |
|---|
| ID | 1186086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 4971868 |
|---|
| End bp | 4972737 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637395745 |
|---|
| Product | cell division protein FtsQ, putative |
|---|
| Protein accession | NP_794159 |
|---|
| Protein GI | 28871540 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1589] Cell division septal protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.292768 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACGGCC CGTCGGCACG TCCTCAGCCC CCCGCTCCCG GCCGCAACAA GCCCGTGCCG
CGTGGCGCCA GCCGGATGGT GGCCAAAGAG CCTCTGTCGG CGCGCCTGCC CAAGGCCAAC
TTCAGTTTTC TGAAGCGTTT GTTCTGGCCA GTGCTGTTGG TGGTGCTGGG CTTTGGTACT
TATGAGGGCG CACAGCGTCT GCTGCCGTAT GCCGACCGCC CGATTGCCCG CATCAATGTG
CAGGGCGATT TGAGTTACAT CAGCCAGCAG GCTGTGCAGC AACGAATTGC GCCTTATGTG
GCGTCGAGTT TTTTCAAGAT CGATCTGGCC GCCATGCGCA CCGAACTTGA GCAGATGCCG
TGGATTGCAC ACGCTGAAGT GCGTCGCGTC TGGCCGGATC AGGTGGTCAT TCGTCTTGAA
GAGCAGTTGC CGGTTGCCCG TTGGGGCGAT GAAGCACTGT TGAATAACCA GGGGCAGGCT
TTCACACCGC GTGAACTGTC CAATTACGAA CATCTTCCCC AGTTGTTCGG CCCGCAGCGG
GCCCAACAGC AGGTGATGCA GCAGTACCAG GTATTGAGTC AGATGTTGCG GCCAATGGGC
TTCTCCATCG TGCGCCTGGA ACTGCGCGAG CGCGGCAGCT GGTTCCTGAC AACAGGCGCC
GGTAGTGCTG GCCCGGGTAT CGAACTGTTG CTTGGACGCG ACCACCTTGT CGAGAAGATG
CGCCGCTTCA TCGCGATCTA CGACAAAACG CTGAAAGAAC AAATAACGAA TATCGCGCGC
GTCGACTTGC GTTACTCCAA CGGCCTTGCG GTCGGTTGGC GCGAACAGGC AGCGGCAACG
ACGGACAAAC CCGCCGTCGC GAAGAATTGA
|
|---|
| Protein sequence | MYGPSARPQP PAPGRNKPVP RGASRMVAKE PLSARLPKAN FSFLKRLFWP VLLVVLGFGT
YEGAQRLLPY ADRPIARINV QGDLSYISQQ AVQQRIAPYV ASSFFKIDLA AMRTELEQMP
WIAHAEVRRV WPDQVVIRLE EQLPVARWGD EALLNNQGQA FTPRELSNYE HLPQLFGPQR
AQQQVMQQYQ VLSQMLRPMG FSIVRLELRE RGSWFLTTGA GSAGPGIELL LGRDHLVEKM
RRFIAIYDKT LKEQITNIAR VDLRYSNGLA VGWREQAAAT TDKPAVAKN
|
|---|
| |