Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4401 |
Symbol | |
ID | 1186082 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4967701 |
End bp | 4968162 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637395741 |
Product | hypothetical protein |
Protein accession | NP_794155 |
Protein GI | 28871536 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.1383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCCATGG CCTTTCGTCC TCTGAATGCC CGCCCACCCG CTGTTTTGCT ACGTGAAGCC AAGCCCCTCA AGGCTATCTT CCGTCACGCC GAGCGCCTGA GCCATTTGCA GCGCCTGCTC GAAAGTCAGT TGCAGCCAGC GGCCCGCGAG CATTGTCATG TGGCGTCGTG GCGCGAAGGC ACGTTGTTAT TGATCGTGAC GGACGGTCAT TGGGCCACGC GCCTGCGTTA TCAGCAGAAG CGTCTGCACC GGCAACTGAT TGCGTTTGAT GAATTCATCA ATCTGACCCG TATTGCCTTC AAGGTGCAGC CACCCGACGC CCCGCGCGGA GCGGCCACGC ACACCATCGA CCTGTCGACG GTCGCCGCCG AAAACATTCA GGCCACCGCC GAGGGCATCA CCGACCCCAA GCTGCGCGCC GCCCTTGAAC GGCTGGCCAG CCACGCCAGG GACAAGAAGT AA
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Protein sequence | MPMAFRPLNA RPPAVLLREA KPLKAIFRHA ERLSHLQRLL ESQLQPAARE HCHVASWREG TLLLIVTDGH WATRLRYQQK RLHRQLIAFD EFINLTRIAF KVQPPDAPRG AATHTIDLST VAAENIQATA EGITDPKLRA ALERLASHAR DKK
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