Gene PSPTO_4401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4401 
Symbol 
ID1186082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4967701 
End bp4968162 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content62% 
IMG OID637395741 
Producthypothetical protein 
Protein accessionNP_794155 
Protein GI28871536 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.1383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCATGG CCTTTCGTCC TCTGAATGCC CGCCCACCCG CTGTTTTGCT ACGTGAAGCC 
AAGCCCCTCA AGGCTATCTT CCGTCACGCC GAGCGCCTGA GCCATTTGCA GCGCCTGCTC
GAAAGTCAGT TGCAGCCAGC GGCCCGCGAG CATTGTCATG TGGCGTCGTG GCGCGAAGGC
ACGTTGTTAT TGATCGTGAC GGACGGTCAT TGGGCCACGC GCCTGCGTTA TCAGCAGAAG
CGTCTGCACC GGCAACTGAT TGCGTTTGAT GAATTCATCA ATCTGACCCG TATTGCCTTC
AAGGTGCAGC CACCCGACGC CCCGCGCGGA GCGGCCACGC ACACCATCGA CCTGTCGACG
GTCGCCGCCG AAAACATTCA GGCCACCGCC GAGGGCATCA CCGACCCCAA GCTGCGCGCC
GCCCTTGAAC GGCTGGCCAG CCACGCCAGG GACAAGAAGT AA
 
Protein sequence
MPMAFRPLNA RPPAVLLREA KPLKAIFRHA ERLSHLQRLL ESQLQPAARE HCHVASWREG 
TLLLIVTDGH WATRLRYQQK RLHRQLIAFD EFINLTRIAF KVQPPDAPRG AATHTIDLST
VAAENIQATA EGITDPKLRA ALERLASHAR DKK