| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4339 |
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| Symbol | |
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| ID | 1186020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4889810 |
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| End bp | 4891333 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395681 |
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| Product | fumarate hydratase, class I, putative |
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| Protein accession | NP_794095 |
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| Protein GI | 28871476 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTGA TCAAGCAAGA CGACCTGATT CAGAGCGTTG CAGATGCACT GCAGTTCATT
TCCTATTACC ACCCCGTGGA CTTCATCCAG GCCATGCACG AGGCGTATCT GCGTGAAGAA
TCGCCTGCCG CCCGCGACTC CATCGCCCAG ATCCTGATCA ACTCGCGCAT GTGCGCGACC
GGTCATCGCC CGATCTGCCA GGACACCGGC ATCGTCACGG TTTTTGTGCG CGTGGGTATG
GATGTTCGCT GGGACGGCGC CACCATGGGC CTGGACGACA TGATCAACGA AGGCGTGCGT
CGCGCTTACA ACCTGCCTGA AAACGTCTTG CGTGCCTCGA TCCTTGCCGA CCCGGCAGGC
GCTCGCAAAA ACACCAAGGA CAACACCCCG GCCGTTATCC ACTACTCCAT CGTCCCGGGT
AACACCGTGG AAGTGGACGT CGCGGCAAAA GGCGGCGGTT CGGAAAACAA ATCGAAGATG
GCGATGCTCA ACCCGTCCGA CTCGATCGTC GACTGGGTTC TGAAAACCGT TCCGACCATG
GGCGCAGGCT GGTGCCCCCC GGGCATGCTC GGCATCGGCA TCGGCGGCAC CGCAGAAAAG
GCCGCGGTCA TGGCCAAGGA AGTGTTGATG GAGTCCATCG ACATTCACGA ACTGAAAGCC
CGCGGCCCGC AAAGCCGTAT CGAAGAGATG CGTCTGGAGC TGTTCGAGAA GGTCAACCAG
CTGGGCATTG GCGCTCAGGG CCTGGGCGGC CTGACCACCG TGCTCGACGT CAAGATCATG
GATTACCCGA CCCACGCCGC GTCGCTGCCG GTGTGCATGA TCCCCAACTG CGCCGCCACC
CGCCACGCGC ACTTCGTGCT CGACGGCAGC GGCCCTGCCT CGCTGGAGGC TCCATCGCTG
GACGCCTATC CGGAAATCGT CTGGGAAGCC GGCCCATCGG CCCGCCGCGT CAACCTCGAT
ACCCTGACCC CGGAAGAAGT ACAAAGCTGG AAACCGGGCG AAACCGTTTT GCTCAATGGC
AAGATGCTCA CCGGCCGCGA CGCAGCGCAC AAGCGCATGG TCGAAATGCT CAACAGGGGT
GAAACCCTGC CGGTAGACCT CAAGGGTCGC TTCATCTACT ACGTCGGCCC GGTTGATCCG
GTACGCGAAG AAGTCGTCGG CCCGGCCGGC CCGACCACGG CCACCCGGAT GGACAAGTTC
ACCCGGCAGA TCCTCGATCA GACCGGGTTG CTGGGCATGA TCGGCAAGTC CGAACGCGGC
CCGACCGCCA TAGAAGCGAT CCGTGACCAC AAGGCCGTGT ACCTGATGGC CGTTGGTGGT
GCTGCCTATC TGGTGGCTCA GGCGATCAAG AAATCCCGCG TCGTGGCCTT CGCCGAGCTG
GGCATGGAAG CGATCTACGA GTTCGAGGTT AAGGACATGC CGGTGACCGT TGCCGTCGAC
AGCACCGGTG AATCCGTTCA CATCACCGGC CCGCAGATCT GGCAGAAGAA GATCAGCGAC
AGTCTGGCGG TGGAAGTGCA GTAA
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| Protein sequence | MTVIKQDDLI QSVADALQFI SYYHPVDFIQ AMHEAYLREE SPAARDSIAQ ILINSRMCAT
GHRPICQDTG IVTVFVRVGM DVRWDGATMG LDDMINEGVR RAYNLPENVL RASILADPAG
ARKNTKDNTP AVIHYSIVPG NTVEVDVAAK GGGSENKSKM AMLNPSDSIV DWVLKTVPTM
GAGWCPPGML GIGIGGTAEK AAVMAKEVLM ESIDIHELKA RGPQSRIEEM RLELFEKVNQ
LGIGAQGLGG LTTVLDVKIM DYPTHAASLP VCMIPNCAAT RHAHFVLDGS GPASLEAPSL
DAYPEIVWEA GPSARRVNLD TLTPEEVQSW KPGETVLLNG KMLTGRDAAH KRMVEMLNRG
ETLPVDLKGR FIYYVGPVDP VREEVVGPAG PTTATRMDKF TRQILDQTGL LGMIGKSERG
PTAIEAIRDH KAVYLMAVGG AAYLVAQAIK KSRVVAFAEL GMEAIYEFEV KDMPVTVAVD
STGESVHITG PQIWQKKISD SLAVEVQ
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