Gene PSPTO_4302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4302 
Symbol 
ID1185983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4849586 
End bp4850257 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content57% 
IMG OID637395644 
Producttranscriptional regulator, TetR family 
Protein accessionNP_794058 
Protein GI28871439 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTC GCACCAAAGA GGAAGCTCAG ATCACCCGCA GCCAGATTCT GGAGGCCGCC 
GAGCAGGCTT TTTATGAGCG AGGCGTCGCC CGCACCACGC TGGCTGACAT TGCGACCCTT 
GCCGGTGTGA CCCGTGGCGC CATCTATTGG CACTTCAACA ACAAGGCTGA TCTGGTCCAG 
GCGATGCTCG ACAGCCTTCA GGAACCGCTC GACGAAATGG CGCAGGCCAG TCAGAGCGAA 
GACGAAGAAG ACCCGCTGGG CTGCATGAGG AACCTGTTGA TTCATTTGTT TCATGAGCTC 
GCACTGGACC CGAAAACCCG TCGCATCAAC GAAATCCTGT TTCACAAGTG CGAGTTTACT 
GACGAGATGT GTGATTTTCG TCGTCAGCGC CAGGACAACG CCATTCAGTG CCACGACCGT 
ATCACCCTTG GCCTGAGCAA TGCCGTGCGC CAAGGCCAGT TGCCACAAGA ACTGGACACG 
GGCCGGGCTG CGGTTGCACT TTTTTCCTAC GTCAACGGCA TCATTTATCA ATGGCTGTTG 
GTCCCTGACA GCTTTTCGTT GCCGGCCGAG GCCGAGCAAC TGGTCGATGT GTGCCTGGAC 
ATGCTGCGCT TCAGCCCTAC CTTGCGGGTA AAAAACAGCC CGGAACTGAA CGTTGAACGT 
GAAAGGTTAT AG
 
Protein sequence
MVRRTKEEAQ ITRSQILEAA EQAFYERGVA RTTLADIATL AGVTRGAIYW HFNNKADLVQ 
AMLDSLQEPL DEMAQASQSE DEEDPLGCMR NLLIHLFHEL ALDPKTRRIN EILFHKCEFT 
DEMCDFRRQR QDNAIQCHDR ITLGLSNAVR QGQLPQELDT GRAAVALFSY VNGIIYQWLL 
VPDSFSLPAE AEQLVDVCLD MLRFSPTLRV KNSPELNVER ERL