Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4219 |
Symbol | lepB |
ID | 1185899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4751478 |
End bp | 4752332 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395565 |
Product | signal peptidase I |
Protein accession | NP_793980 |
Protein GI | 28871361 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0681] Signal peptidase I |
TIGRFAM ID | [TIGR02227] signal peptidase I, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0233251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACTAA ATTTCCCGCT GTTGTTGGTC ATCGCTGTCT TCGTCTGTGG CGTGCTTGCA CTGATTGATC TGGTCTTCCT GGCGCCGCGT CGCCGGGTTG CCATTTCCAA CTATCAGGGT AGCGTCGGAG AACCTGACAT TGCTGTCGTC GAGCGCTTGA ACAAGGAGCC GTTGCTGGTT GAATACGGCA AGTCGTTCTT CCCGGTGCTG TTCATCGTGC TGGTGCTTCG ATCGTTTCTG GTAGAGCCAT TCCAGATCCC TTCGGGCTCC ATGAAACCGA CGCTGGACGT GGGCGATTTC ATTCTGGTCA ACAAGTTCTC GTATGGCATC CGCCTGCCGG TACTGGACCA GAAAGTCATC GAGCTCGGTG ATCCGCAGCG TGGCGATGTA ATGGTGTTCC GCTACCCAAG CGACCCGAGC GTCAACTACA TCAAGCGTGT GGTCGGTCTG CCGGGTGATC GCATCCGCTA CACCAGCGAC AAGCGGTTGT TCATCAATGG CGAGCTGGTG GCCAAGAAAC TGATCGGCAC CGAACCCGGC ACACTGGGCA GTGCAGAGCT GTACGAAGAG CAACTGGGCA CCGTGGAACA CCAGATCCGT CAGGAAATGA GCCGTTACCG TGCGCCGCCT GACAGCGAAT GGACCGTCCC GGCTGCGCAC TACTTCATGA TGGGCGACAA CCGCGACAAC TCCAATGACA GCCGTTACTG GGATGATCCC AACATTCCCA AGGACGAGCT GGGCATGGTT CCGGACAAGA ACATCGTCGG CAAGGCCTTC GCTGTCTGGA TGAGCTGGCC GGAGCCGAAA TTGAGTCACT TCCCTAATTT TGCACGCGTA GGGTTGATCA AGTAA
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Protein sequence | MSLNFPLLLV IAVFVCGVLA LIDLVFLAPR RRVAISNYQG SVGEPDIAVV ERLNKEPLLV EYGKSFFPVL FIVLVLRSFL VEPFQIPSGS MKPTLDVGDF ILVNKFSYGI RLPVLDQKVI ELGDPQRGDV MVFRYPSDPS VNYIKRVVGL PGDRIRYTSD KRLFINGELV AKKLIGTEPG TLGSAELYEE QLGTVEHQIR QEMSRYRAPP DSEWTVPAAH YFMMGDNRDN SNDSRYWDDP NIPKDELGMV PDKNIVGKAF AVWMSWPEPK LSHFPNFARV GLIK
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