| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4215 |
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| Symbol | recO |
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| ID | 1185895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4748659 |
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| End bp | 4749342 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637395561 |
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| Product | DNA repair protein RecO |
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| Protein accession | NP_793976 |
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| Protein GI | 28871357 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
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| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.322545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACGC CCACCGGCCA ACCTGCTTAT GTGCTCCACA GCCGTGCGTA TCGTGAAAAC
AGCGCGCTGG TCGATTTCCT CACGCCTCAG GGCCGCCTGC GTGCGGTGCT GCGCAGCGCC
AAGGGCAAGG CCGGTTCGCT GGCGCGGCCG TTCGTGCCGC TGGAAGTCGA GTTTCGCGGG
CGTGGCGAAC TGAAAAACGT CGGTCGTATG GAGAGCGCAG GGGTCGCCAC CTGGATGACC
GGTGAAGCAC TGTTCAGCGG CATGTACCTC AACGAACTGC TGATTCGCCT GCTGCCCGCC
GAAGACCCGC ATCCCGCCGT ATTCGAACAC TACGCCGCCA CCTTGCTGGC CCTCGCGCTG
GGTCGTCCGC TGGAACCGCT GTTGCGTTCG TTTGAATGGC GCTTGCTCGA CGACCTGGGC
TACGGCTTTG CAATGGACGC TGATATCAAC GGTGAACCGC TGGCGGTTGA TGGCATGTAC
CGTCTACAAG TGGATGCCGG GCTTGAACGG GTCTACCTGC TGCAGCCTGG CCTTTTTCAG
GGCGCAGAGC TGCTGGCCAT GTCCGACGCC GACTGGAGCG TTCCCGGTGC GTTGTCGGCG
GCCAAGCGCC TGATGCGTCA GGCGCTGGCG GTGCACCTGG GCGGTCGCCC GTTAGTCAGC
CGTGAACTGT TTCGCAAGCC GTAA
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| Protein sequence | MSTPTGQPAY VLHSRAYREN SALVDFLTPQ GRLRAVLRSA KGKAGSLARP FVPLEVEFRG
RGELKNVGRM ESAGVATWMT GEALFSGMYL NELLIRLLPA EDPHPAVFEH YAATLLALAL
GRPLEPLLRS FEWRLLDDLG YGFAMDADIN GEPLAVDGMY RLQVDAGLER VYLLQPGLFQ
GAELLAMSDA DWSVPGALSA AKRLMRQALA VHLGGRPLVS RELFRKP
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