Gene PSPTO_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4195 
Symbol 
ID1185875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4725161 
End bp4725529 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content57% 
IMG OID637395541 
Producthypothetical protein 
Protein accessionNP_793956 
Protein GI28871337 
COG category[S] Function unknown 
COG ID[COG4628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGTTT CGCAACAGTG CATTAAGGCT TGTGGGTTTA TGCACCCGCG ACGCTTACAA 
TGGCTGACGT TTTCGACTAG CCCGGCGCAT CCCGTGCGCC TGTTTCTGGC TCATCTCTAC
TCATTTGCTT CAAGGTTCGT CATGACAACA CCCAATCCCG ACCCGCTGCA CGGCGTCACC
CTCGAGCAGA TTCTCAGGGC TTTGATCGAG CACTATGAAT GGTCCGGTCT GGCCGAGCGC
ATCGACATTC GCTGCTTCAA GAGCGACCCG AGCATCAAGT CCAGCCTGAC CTTTCTGCGC
AAGACGCCCT GGGCGCGCGA AAAAGTCGAA GCCCTCTACG TAAAGCTGCA TCGCGGCAAA
GGCTGGTAG
 
Protein sequence
MPVSQQCIKA CGFMHPRRLQ WLTFSTSPAH PVRLFLAHLY SFASRFVMTT PNPDPLHGVT 
LEQILRALIE HYEWSGLAER IDIRCFKSDP SIKSSLTFLR KTPWAREKVE ALYVKLHRGK
GW