Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4193 |
Symbol | |
ID | 1185873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4723642 |
End bp | 4724409 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395539 |
Product | iron utilization protein, putative |
Protein accession | NP_793954 |
Protein GI | 28871335 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2375] Siderophore-interacting protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCGC CACAATCGAT CCATCGTGTG ATGCATGAAA TCAAACGCCG CAAATTGAAG GTTGTGCGGG TCACGGATCT AACGCCACTG ATGCGCCGCA TCACGCTACA AGGCCCGGAA CTGGCGGGTT TTATCAGTCT GGGGACAGAC GACCACGTCA AACTGTTCTT CCCGCAAACG CCGCAAGAGC ATGCTGCGCT GGAAGCGTTG ACGGCCACCA GCGACAAAGA CGCGCCGCGT CCGCCGATGC GCGATTACAC CCCGCGCCGC TATGACGAAA ACAGCGGCGA ACTGGACATC GATTTTGTCC TGCATGGCGA AGGTCCGGCT GCCACTTGGG CCGCTCAGGC AAAGCCGGGG CAGTTTCTGC ATATCGCCGG CCCGCGCGGT TCAATGGTGG TGCCGGACAT GTTCGACAGC TATTTGCTGA TCGGCGATGA AACGGCCATC CCGTCCATCG CTCGGCGTCT GGAATCACTG CCCGCCAACC GTGCTGCACT GGTGGTGGTC GAAGTGGCCA ATCAGCAGGA ACAGCAAACC TTCGCGAGCG CAGCGCAGGT CGATGTAATC TGGATCGTGC GCAGCGAGCA GAACCTGGTG GACGTCGTTC GTCGCCTGGA GATGCCCGAG GGCAAGCTGT ATGCGTGGGT CGCGACCGAG TCGGGTCTGT CACGCAAGGT GCGCCGTGTG CTGCTCGATG AGTTCGGCCT GGAAGACGAT TTCGTCAAGG CTGCCGGTTA CTGGAAGCTG AGTGACACCG AAGAGTAA
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Protein sequence | MNSPQSIHRV MHEIKRRKLK VVRVTDLTPL MRRITLQGPE LAGFISLGTD DHVKLFFPQT PQEHAALEAL TATSDKDAPR PPMRDYTPRR YDENSGELDI DFVLHGEGPA ATWAAQAKPG QFLHIAGPRG SMVVPDMFDS YLLIGDETAI PSIARRLESL PANRAALVVV EVANQQEQQT FASAAQVDVI WIVRSEQNLV DVVRRLEMPE GKLYAWVATE SGLSRKVRRV LLDEFGLEDD FVKAAGYWKL SDTEE
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