| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4148 |
|---|
| Symbol | |
|---|
| ID | 1185828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4676089 |
|---|
| End bp | 4676964 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637395494 |
|---|
| Product | iron-sulfur cluster-binding protein |
|---|
| Protein accession | NP_793909 |
|---|
| Protein GI | 28871290 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
|---|
| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAT TGATTCGCTT GCTTCCCGAC GTGGACCTGA TCCGGAGTAT CGACGCCCTA
TTACCGCAGA CGCAGTGCGG CAAGTGCGGC CACTCCGGCT GCCAGCCCTA CGCCGAGGGC
ATTGCGGGTG GCGAGGCCAT CAACAAATGC CCGCCAGGCG GTGACGAAAC CATTATCCAG
CTGGCCGAAC TGCTCGCAGT TCCGGTCCTG CCACTGGATA AGGAACGCGG CGAGGCGCCT
GCGCAGGTTG CCTTCATTCG CGAAGCAGAG TGCATTGGCT GTACCAAATG CATTCAGGCT
TGCCCGGTCG ATGCGATTCT CGGTGCGGCG AAGCTGATGC ACACCGTGAT TATCGATGAA
TGCACGGGCT GTGACCTGTG CGTCGCCCCT TGCCCGGTGG ACTGCATTGA AATGCATGCG
CTGCCACTGG CCAACGTCAC CCCGATTGTT GGCGGCCTGG CACCTACTGC CGACCTGCAA
CACGCTCGCC TGCGCAAGCG CAGCCATGCC CGACAGCGCT TTGAGTCACG CAATGCACGC
TTGCGACGCG AGCAGCAGAT GCGACTGGCA GAACGTCTTG CCAGGGCGCA GAGAGCCGAA
TCCATTCGTG ACGCCGCACC TCAATCTGCC ACGACGTCCG TGCGAAGCGA CAAGCCCGCA
CCACCCGATG AAGCGCTGAA AAAAGCCAGG ATTGCGCTGG CCATGAGTCG CGCGCAGCTC
AACAAGTCGC TAAAGGCTTT TGGACACCCT CCGGTTGCGG AGCAGGCTGC CAGGCTTCTA
GAGCTACAGC GCGAATACGA AGCCGCCGAA CAGGCACTCG AAGCCCTCCT GCCGACGCCC
ACTCTGACCG ATCCCGAGGA AACGCTCCTT CCATGA
|
|---|
| Protein sequence | MTELIRLLPD VDLIRSIDAL LPQTQCGKCG HSGCQPYAEG IAGGEAINKC PPGGDETIIQ
LAELLAVPVL PLDKERGEAP AQVAFIREAE CIGCTKCIQA CPVDAILGAA KLMHTVIIDE
CTGCDLCVAP CPVDCIEMHA LPLANVTPIV GGLAPTADLQ HARLRKRSHA RQRFESRNAR
LRREQQMRLA ERLARAQRAE SIRDAAPQSA TTSVRSDKPA PPDEALKKAR IALAMSRAQL
NKSLKAFGHP PVAEQAARLL ELQREYEAAE QALEALLPTP TLTDPEETLL P
|
|---|
| |