Gene PSPTO_4142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4142 
Symbol 
ID1185822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4670324 
End bp4670980 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content62% 
IMG OID637395488 
Producthypothetical protein 
Protein accessionNP_793903 
Protein GI28871284 
COG category[R] General function prediction only 
COG ID[COG1407] Predicted ICC-like phosphoesterases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCTT ACCTCGCGGT CACGCTGGCG GGCGCAGAAT TATGGCTGTT GGCCGACAAG 
GCTATTTATT ACCCCCTGGA GCGCGCTTTG CTGATCGCAG ACGCACACTT TGGCAAGGCC 
GCGGCTTATC GCAAGCTCGG CCAGCCTGTG CCGCACGGCA CGACGCAGGA AAATCTGCGT 
CGGCTCGACA GCCTGCTGAA CACCTACCCC TGTGACCATC TGATCTTTCT GGGCGATTTT 
CTGCATGCTC CAGAGTCCCA TGCGGCAGGC ACGCTGTCTG CGCTGGAACA ATGGCGGGCA 
GAACGTTCGA CGCTGCGCAT CACCCTGATC CGCGGCAACC ATGACAAACG GGCGGGCGAC 
CCTCCGCAAT ATCTGGGCAT CGACGTCGTA CCTGAACCCC TGCCGCTGGG GCCATTTGCC 
TTGCAACACG AGCCCGATCC GCACCCTGAG CTCCACGTGC TCGCAGGGCA CGTTCACCCG 
GTTTACAGGC TTTACGGCCG GGGCAGGCAA AGCTTGCGGC TGGCGTGCTT CTACCTCGGC 
CAGCGCGTCA GCCTGCTACC GGCATTCGGC GAATTCACGG GGGGCTTTCG TATCCAGCCA 
GTCGAGCACA GCTCGGTTTA TGTCACCGGC GGCGATGCGG TGTGGAGGGT GGTCTGA
 
Protein sequence
MNPYLAVTLA GAELWLLADK AIYYPLERAL LIADAHFGKA AAYRKLGQPV PHGTTQENLR 
RLDSLLNTYP CDHLIFLGDF LHAPESHAAG TLSALEQWRA ERSTLRITLI RGNHDKRAGD 
PPQYLGIDVV PEPLPLGPFA LQHEPDPHPE LHVLAGHVHP VYRLYGRGRQ SLRLACFYLG 
QRVSLLPAFG EFTGGFRIQP VEHSSVYVTG GDAVWRVV