Gene PSPTO_4128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4128 
Symbol 
ID1185808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4651186 
End bp4653621 
Gene Length2436 bp 
Protein Length811 aa 
Translation table11 
GC content59% 
IMG OID637395474 
ProductTonB-dependent siderophore receptor 
Protein accessionNP_793889 
Protein GI28871270 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4774] Outer membrane receptor for monomeric catechols 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCGCT CGTTAGACAC CCTTCTGCGC CCCAGTCTTC TGGCGATGGC GATTGCCCTG 
TGCACGCCGC TGGTCAGCCC GCTGTTGATG GCTGCGCAAC AGACCAGCGT TGTTGCCTAC
GACCTGCCTG CAGGGGCCTT GCCGACCACA TTGAATCAGA TCGCCAGCCA GAGTGGCCTA
GCACTGAGCC TTGATCCTGC GCTGGTTGCC GGCAAAACGA GCTCGCCGGT GAAGGGCAGT
TTCGATGCGC CGGGTGCCCT GCGGGAAGCG TTGCGTGGCA GTGGCTTGCA ATTGGTGCAA
AGCAGCGTCG GGACCTACAC GCTGATGGTC ATGGAGCAGA ACGCCCTGAA CCTGTCGGAC
GTCAATATCA ACGCCAGCAG CGCACCTTTA GAAGGCTCGG AAGCGGCAGG TTATCGCAGC
GAAAACATCA GCAGTGTCGG CGCGCTGGGC GGCATGAAGT TGCAGGACGC GCCGTATTCC
ATCAGCGTGA CACCCCGGGC TCTGCTGAAA AACATTCAAG CCACCTCGCT GGACGATGTC
ATCAAGCACA ACCCGTTCAC CCAGATGTAC TCGCCGACCA GCGCCGGTTA CGCCAGTGCC
GTCAATATTC GCGGTTTCAG CAGTTCTGGC AGTCTGAACA TCGCCAATGA CGGCCTGCGC
TTTACCAACG GTGCCGATGG CAGCAACTAC ATTGAAGAGA TGGAGCAACT GGAAGTCATC
ACCGGCCTGA CCGGCTTCCT GTACGGCCCG GCCTCACCGG GCGGGCTGGT CAACTACGTC
ATCAAACGCC CCACCTATGA GCGCTACAAC AGCGTCACCC TGGGCAATGC CGGTGGCGAA
AACTACTACC TGCATGGCGA TTTCGGCGGG CCGATCGACA GTGAAGGCAA ATTCGCCTAT
CGCCTCAACG TGCTGACCCA GGACGGCGAA ACCGCCGTTG ATATGAACAA GCGCCGTCGT
GAAATGATTT CCCTGGCGCT GGACTGGAAC GTCTCCGATG ACCTGCTGGT GCAGTTCGAC
GCCTCGCACA AGAAAACCCA GATTCGCGGT CTGACCAGTT ACTGGTATTT CAACGACCAG
TCCTTGCGCC CCAGTGCGGC GTCGCTGGAC AACGACAAGC TCTACAGCCA GAAATGGTCG
TTTTCCGATT ACGAGTCAGA CAAGGCGGGC GTACGCGCCA AATGGCGTCT GAATGACACC
TTCACCTTGC GCGCAGCGTT CGCGGCTCAG CAGTACACGT CGGAAAACAC CTACACCGGG
CCGACGGTCT CCAGCGCAGG CGTGCACTCG CAGCCGCTGT ACGCTTTCGC CCCGATTGAG
ACCGAAGAAA AGACCGGCTC GCTGTTTCTG GATGCCGCAT TCGATACCGG CTTTCTTGGC
CACAAAGTCA CCTTTGGTTA TCAGGGCAAT ACGTCTCGCC AAAAACAGTA CGAGGACCAC
GTCCCGTACA CGCCTGCTCA GCCCGGCCCG CAATACACCT CGCCGGTCGG CACGATCCCG
CTGGACCAGA CCCCTCAGGT CGGTAAGCCG TCCTACTCGA TTGGTCACGG CAACCAGCGC
CTGGCCAATA GCACGCAGAG CAACAACTTC CTGATCGGCG ACGTCATCAC CTTCAACGAG
CAATGGTCGG CGATTCTTGG TGTGACCAAC ACGCAGATCA AGACCTACGC CAATGAGTTC
GTTTACGCCA AGGCATTCGG CTCGGCTGAA ACCGAGACTA AATACGATGA AAGCAAAACC
TCGCCGAATA TCTCGCTGGT CTACAAGCCG CTGCCGTGGC TGACCACCTA CGCGACCTAT
ATAGAAGGCC TGCAAGCCGG AGGCATCGCG CCAAGCGGCA CCGCCAACGC CGGTCAGGCT
TTTGCGCCTG AAGTCAGCGA GCAGTATGAA ATCGGCGCCA AGGCGACGCT GGGTGAAACA
CTGTTCACTC TCGCGCTGTT CAATATCGAG AAGCCCAACG GCTACACCAC GGGCGGGAAT
ATCTACGTGG TGGACGGGCG TCAGGAAAAC AACGGGCTGG AGTTCAGCGT GACCGGCAAA
GTCATTCCGG AACTGACGCT GGTCGGCGGT TTCACCTTGC TGGACCCGAA GATCAAGAAA
ACCGGCGTGT CAGAGGATGA AGGTAACGTG CCCACCAATG TCGCCAAGCA ACTGGCCAAG
GTCTATGCCG AATACGACAT CAATCAGATG CCGGGCCTGG CCATGACCGG CGGCGCGTTC
TTTACCGGCA AACAATATAC CGACCAAAGC AACGAAAACG ACCTGCCGTC CTTCACCACC
TTCGACGCCG GCGCGCGTTA CCGCATGCGC GTCTCGGAAA ATGACCTGAC CTTGCGGGTC
AACGTCAGCA ACCTGGCCAA CAAGGAATAC TGGCTCAACA GCAGCTACCT GGGCGACCCG
CGCACCGTCG CGTTCTCGGC GCAGCTGGAG TTTTGA
 
Protein sequence
MSRSLDTLLR PSLLAMAIAL CTPLVSPLLM AAQQTSVVAY DLPAGALPTT LNQIASQSGL 
ALSLDPALVA GKTSSPVKGS FDAPGALREA LRGSGLQLVQ SSVGTYTLMV MEQNALNLSD
VNINASSAPL EGSEAAGYRS ENISSVGALG GMKLQDAPYS ISVTPRALLK NIQATSLDDV
IKHNPFTQMY SPTSAGYASA VNIRGFSSSG SLNIANDGLR FTNGADGSNY IEEMEQLEVI
TGLTGFLYGP ASPGGLVNYV IKRPTYERYN SVTLGNAGGE NYYLHGDFGG PIDSEGKFAY
RLNVLTQDGE TAVDMNKRRR EMISLALDWN VSDDLLVQFD ASHKKTQIRG LTSYWYFNDQ
SLRPSAASLD NDKLYSQKWS FSDYESDKAG VRAKWRLNDT FTLRAAFAAQ QYTSENTYTG
PTVSSAGVHS QPLYAFAPIE TEEKTGSLFL DAAFDTGFLG HKVTFGYQGN TSRQKQYEDH
VPYTPAQPGP QYTSPVGTIP LDQTPQVGKP SYSIGHGNQR LANSTQSNNF LIGDVITFNE
QWSAILGVTN TQIKTYANEF VYAKAFGSAE TETKYDESKT SPNISLVYKP LPWLTTYATY
IEGLQAGGIA PSGTANAGQA FAPEVSEQYE IGAKATLGET LFTLALFNIE KPNGYTTGGN
IYVVDGRQEN NGLEFSVTGK VIPELTLVGG FTLLDPKIKK TGVSEDEGNV PTNVAKQLAK
VYAEYDINQM PGLAMTGGAF FTGKQYTDQS NENDLPSFTT FDAGARYRMR VSENDLTLRV
NVSNLANKEY WLNSSYLGDP RTVAFSAQLE F