| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4122 |
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| Symbol | tsk |
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| ID | 1185802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4646738 |
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| End bp | 4647652 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395468 |
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| Product | nucleoside-specific channel-forming protein |
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| Protein accession | NP_793883 |
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| Protein GI | 28871264 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCCAT TGCTGCTCGC AGCAGTTGCT GCATTGCCCT GCACCGCAGC ATTGGCGCAG
CCGGCGAGCG CAGAAGATTC CGCGCAGGGC GAAGCGCTCA GCCCCCCCGC ATCGCCCAAG
GAAGGCAAAG GCGCGTACTT TTCAGACTGG TTCAATCAGG ACCTGACGCT GATCGGCAGC
AAGGACATCA GTTTCGGCCC CAAGCCCAAC GATGACATCT ACCTGGAGTA CGAGTACTTC
GGCCGCAAAG GGCCGTTTGA GCTGTACGGC TATGTGGATG TGCCGAAGAT CCTCGGCATC
GGCAACGATA ATGACAAAGG CGTCTGGGAC CATGGCTCGC CACTGTTCAT GGAGCACGAG
CCGCGCATTT CCATCGACTA TCTGGCCGGT CGCAGCCTGG CGGTCGGGCC GTTCAAGGAA
TGGTACGTCG CCTTCGACTG GATCTACGAC CACGGCAGCA ACTCGGCCAA CCGCGCCAAC
ACGCTGTACA GCGGCTTGGG CACGGACATC GACACCCATT CGCGGGTCAA TCTGTCGGCC
AATTTCTACG GCCGCTACCA GTGGGAAAAC TACGGCGCCA GCAACGAGTA TTCGTGGGAC
GGTTATCGTG CCCAGCTCAA ATACATCGTA CCGATCAGCA AATTCGACAA TGGCGCATCG
CTGACCTATA TCGGCTTCAC CAACTTCGAC TTCGGCTCGG ACCTCAAGAA CGATCCGGCA
CGCACCGGTA ACTCCACGGT TGCCACCAAC GTGCTGCTTT ATGCCTTCAC CCACCTGCGC
TTCACGCTGG TAGGCCGTTA TTTCCACAAC GGCGGCAACT GGCAGGACGG CAGTGAGCTC
AACTTCGGCG ACGGCAACTT CCGGGCGCGC TCGGACGGTT GGGGTTATTA CGCAGGCGTG
GGTTATCAGT TCTGA
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| Protein sequence | MIPLLLAAVA ALPCTAALAQ PASAEDSAQG EALSPPASPK EGKGAYFSDW FNQDLTLIGS
KDISFGPKPN DDIYLEYEYF GRKGPFELYG YVDVPKILGI GNDNDKGVWD HGSPLFMEHE
PRISIDYLAG RSLAVGPFKE WYVAFDWIYD HGSNSANRAN TLYSGLGTDI DTHSRVNLSA
NFYGRYQWEN YGASNEYSWD GYRAQLKYIV PISKFDNGAS LTYIGFTNFD FGSDLKNDPA
RTGNSTVATN VLLYAFTHLR FTLVGRYFHN GGNWQDGSEL NFGDGNFRAR SDGWGYYAGV
GYQF
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