Gene PSPTO_4120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4120 
Symbol 
ID1185800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4643754 
End bp4645898 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content63% 
IMG OID637395466 
ProductATP-dependent helicase, DinG family 
Protein accessionNP_793881 
Protein GI28871262 
COG category[L] Replication, recombination and repair
[K] Transcription 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAGTA CCGAACTCAA AACCCAGATC CAGGGCGCTT ACTCGCGTTT CCTCGAAGCC 
AAGAGCCTCA AACCGCGCTA TGGCCAGCGA TTGATGATCG CTGAAGTCGC CAAGGTGCTG
GGGGACATTG ATACCGATGA AGAGGGGCGT CGTTCGGGCG ACCCTGCAGT CGTGGCTGTC
GAGGCCGGGA CGGGCACCGG CAAGACCGTG GCCTACGCCA TCGCCGCAAT TCCCACTGCC
AAAGCGGCGG GCAAACGGCT GGTGATTGCC ACGGCAACCG TCGCGCTGCA GGAGCAGATC
GTCTACAAGG ACCTGCCGGA CCTGATGCGC AACAGCGGTC TGAACTTCAC CTTCTCGTTG
GCCAAGGGGC GAGGCCGTTA CATGTGCCTG TCCAAACTCG ACGCATTGCT GCAGGAGAGT
GACGCGACCA ACGCGACCGC GCAGCTGTTC GAGGAAGAAG GCTTCAAGAT CGAGGTCGAT
GAAGCCAGCC AGAAGCTGTT CACCAGCATG TTGCAGAAGC TGGCGGGCAA CAAATGGGAC
GGTGACCGCG ACAGTTGGCC ACAGGAACTC GCCGACCAGG ACTGGGCGCG GCTGACCACC
GATCACAGCC AATGCACCAA CCGTCATTGC CCCAACTTCC AGCAGTGCGC CTTCTATAAA
GCGCGCGAAG GCATGGGCAA GGTTGACGTG ATCGTCACCA ACCACGACAT GGTGCTGGCT
GACCTCGCGC TGGGCGGCGG CGCAGTATTG CCAGACCCGC GTGACACGCT GTACGTGTTC
GACGAAGGCC ATCACTTGCC CGACAAGGCC ATCGGCCACT TTGCCCATTA CACCCGCTTG
AAATCCACCG CCGACTGGCT GGAGCAGACC GCCAAGAACC TCGCCAAGCT GCTGGCCCAG
CACCCCTTGC CTGGCGACCT GGGCAAGCTG ATCGAGCAAG TGCCGGAGCT GGCCCGCGAG
ATCAAGGGCC ATCAGCAGTT CATGTTCGGC GCCTGCGAGC AACTGGCGGA TTTCCGCGCC
GGTGAAGACA TGCAAGGCCG TGAACGGCCT CGGCATCGCT TTATCGGTGG CGTGATCCCC
GAGCACATCC GCGAGATGGG CATCGAACTG AAAAAGGGTT TCGCCCGTCT GGATGATCTG
TTCACGCGCC TGACTGAACT GCTTAAAGAA GGCATGGACG GCGAGGTCAA CATCGGCATC
GCCAGCCATC AGGCTGAAGA GTGGTATCCG TTGTTCGGCA GCCTGCTGGC CCGGGCCCAC
GGCAACTGGG AGCTGTGGAC GGCGTTCACC GCCGAAGACC CGGAAGACAG CCCGCCGATG
GCACGCTGGC TGACCCTGGC CGACAGCGGC GCATTGTTCG ATATCGAGGT CAACGCCAGC
CCGATTCTGG CTGCCGAGAT GCTGCGCCGT AACCTGTGGA ACATCGCCTA TGGTGCGCTC
GTGACCTCGG CCACCCTGAC CGCACTGGGC AAGTTCGACC GTTACCGCAT GCGTGCCGGC
CTGCCTAAAG GTGCCGTGAC GGCGGTGGTG CCCAGCCCGT TCCACCACGC CGACGCTGGG
GTGTTGCGGG TGCCGGACCT CAAGGCCGAC CCGCGTGACT CGGTGGCCCA TACCGCTGCG
ATCATTCGTG ACCTGCCCGG TCTGGTCGAA GGTTCGCGAG GCACGCTGGT GCTGTATTCG
TCGCGCAAGC AGATGCAGGA CGTTTTCGAT GGCCTGGACC GCGACTGGCG CAAGCAAGTG
TTCATTCAGG GCAATCTGTC CAAACAGGAG ACGCTGAACA AGCACAAGGC ACGGGTCGAC
AGTGGCGAAT CCAGCGTGCT GTTCGGGCTG GCCAGCTTTG CCGAAGGGGT GGACTTGCCC
GGTGCATATT GCGAGCACGT GGTAATCGCC AAAATTCCAT TCGCGGTGCC GGACGACCCG
GTCGAGGCGG CGCTGGCCGA GTGGATCGAG GCGCGTGGCG GCAACCCGTT TATGGAAATC
GCCGTGCCTG ATGCGTCGTT GCGTCTGGTG CAGGCCTGTG GCCGGTTGCT GCGCACCGAA
GAAGACCGCG GCACCATCAC GCTGCTGGAC CGTCGCGTCG TCACCCAGCG CTACGGCAAG
GCGATTCTCA ATGCGTTGCC GCCGTTCCGC CGCGAGATTT CCTGA
 
Protein sequence
MISTELKTQI QGAYSRFLEA KSLKPRYGQR LMIAEVAKVL GDIDTDEEGR RSGDPAVVAV 
EAGTGTGKTV AYAIAAIPTA KAAGKRLVIA TATVALQEQI VYKDLPDLMR NSGLNFTFSL
AKGRGRYMCL SKLDALLQES DATNATAQLF EEEGFKIEVD EASQKLFTSM LQKLAGNKWD
GDRDSWPQEL ADQDWARLTT DHSQCTNRHC PNFQQCAFYK AREGMGKVDV IVTNHDMVLA
DLALGGGAVL PDPRDTLYVF DEGHHLPDKA IGHFAHYTRL KSTADWLEQT AKNLAKLLAQ
HPLPGDLGKL IEQVPELARE IKGHQQFMFG ACEQLADFRA GEDMQGRERP RHRFIGGVIP
EHIREMGIEL KKGFARLDDL FTRLTELLKE GMDGEVNIGI ASHQAEEWYP LFGSLLARAH
GNWELWTAFT AEDPEDSPPM ARWLTLADSG ALFDIEVNAS PILAAEMLRR NLWNIAYGAL
VTSATLTALG KFDRYRMRAG LPKGAVTAVV PSPFHHADAG VLRVPDLKAD PRDSVAHTAA
IIRDLPGLVE GSRGTLVLYS SRKQMQDVFD GLDRDWRKQV FIQGNLSKQE TLNKHKARVD
SGESSVLFGL ASFAEGVDLP GAYCEHVVIA KIPFAVPDDP VEAALAEWIE ARGGNPFMEI
AVPDASLRLV QACGRLLRTE EDRGTITLLD RRVVTQRYGK AILNALPPFR REIS