| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4115 |
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| Symbol | |
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| ID | 1185795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4639663 |
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| End bp | 4640127 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395461 |
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| Product | lipoprotein SlyB, putative |
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| Protein accession | NP_793876 |
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| Protein GI | 28871257 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3133] Outer membrane lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.404382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCAAGT CTGCTCTTCT GGTTGCTTCG TTCACTGCGA TGGCGTTGAT GCTGGGCGGC
TGTACCTCAA ATCTGACCGG TGATTCCTAT TCCCGCGATG AGGCCAGGAC TGTACAGACT
GTCCGCATGG GCACCATCGA ATCCTTGCGT CCGGTCAAGA TCGAAGGCAC CAAGACGCCA
ATCGGCGGTG TTGCGGGCGC GGTCGTCGGC GGCGTTGGCG GCAGCGCCAT CGGTGGCGGT
CGCGGCAGCG TCGTGGCTGC AGTGATCGGC GCGGTGGCAG GTGGTCTGCT GGGTTCAGCG
ACCGAAGAGG GCCTGACCCG CACGCAAGGT GTTGAAATCA CCGTACGTGA AGATGATGGC
AGCATGCGTG CTTACGTGCA GCAGGTTCAG GAAAACGAGA TTTTCCGGGT CGGCGAGCGC
GTACGCATCA TGAGCGTCAA CGGCACGAGC CGCGTGAGCC ACTGA
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| Protein sequence | MRKSALLVAS FTAMALMLGG CTSNLTGDSY SRDEARTVQT VRMGTIESLR PVKIEGTKTP
IGGVAGAVVG GVGGSAIGGG RGSVVAAVIG AVAGGLLGSA TEEGLTRTQG VEITVREDDG
SMRAYVQQVQ ENEIFRVGER VRIMSVNGTS RVSH
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