| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4110 |
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| Symbol | |
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| ID | 1185790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4633906 |
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| End bp | 4635171 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395456 |
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| Product | high-affinity branched-chain amino acid ABC transporter, permease protein |
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| Protein accession | NP_793871 |
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| Protein GI | 28871252 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.015431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGT CTTTCAAACA GGCGCTGTTC AGCGCCGCAC TGGTCTGGGC CGTGGCCTAC
CCGGTGTTCG GCCTGAAACT GGCGTTCTCC GGCGTGACCC TGCAAGTGCA GAATGCCAGC
CCGCTGACCC TGACCATTAT TGCCGTGTGC TCGGTGCTGC TGTTTCTGCG CGTGCTGTTC
GCCGAGCAAA TCAGCAGCCT GCGTCGCGGC TCGGAAAAGC CGCTGATCCC GCAGAAGACC
AGCGACTTCC TGACTCAGCC GAAAACCCAG CGCTGGGGCC TGGCGGCCCT GATCGTGCTG
GCCTTCATCT GGCCGTTCTT CGGCTCGCGC GGTGCGGTGG ACATCGCCAC GCTGATCCTG
ATCTACGTCA TGCTCGGCCT GGGCCTGAAC ATCGTCGTCG GCCTGGCCGG CCTGCTCGAT
CTCGGCTACG TGGGTTTCTA TGCGGTCGGT GCCTACAGCT ACGCCCTGCT GTCCCATTAC
TACGGGCTCG GCTTCTGGAT CTGCCTGCCG ATTGCGGGGA TGATGGCGGC AGTGTTCGGC
TTCTTGCTGG GCTTCCCGGT ATTGCGTTTG CGCGGCGACT ATCTGGCCAT CGTGACGCTG
GGGTTCGGCG AGATCATCCG TATTTTCCTG CGTAACCTCA CCGAGTTGAC GGGTGGCCCG
AATGGCATCA GCAACATCGA CAAGCCGACC TTTTTCGGCC TGACGTTCGA GCGCAAAGCG
GCCGAAGGTA TGCAGACCTT TCACGAGTAT TTCGGCCTGC CGTACAACTC GATCAACAAG
GTTGTCTTTC TCTACCTGAT CGCCCTGCTG CTGGCACTGG CGGCGCTGTT CGTCATCAAC
CGTCTGCTGC GCATGCCGAT CGGCCGGGCC TGGGAGGCGC TGCGTGAAGA CGAAATCGCC
TGCCGCGCGC TGGGCCTGAA TCCGACCGTC ATCAAGCTGT CGGCCTTCAC CCTGGGCGCT
GCATTCGCCG GTTTCGCCGG CAGCTTCTTC GCGGCCCGCC AAGGCCTGGT GACACCCGAA
TCCTTCACCT TCATCGAGTC GGCAATCATC CTCGCCATCG TTGTGCTCGG TGGCATGGGC
TCGCAACTGG GCGTGATTCT GGCGGCCATT GTGATGATCC TGCTGCCGGA ACTGATGCGT
GAGTTCAGCG ACTACCGCAT GTTGATGTTC GGCGCCCTGA TGGTGCTGAT GATGATCTGG
CGTCCTCAAG GCTTCCTGCC GATGCAACGG CCTGAAATGA AATTGAAAGC GGAGCTGCCC
AAATGA
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| Protein sequence | MSKSFKQALF SAALVWAVAY PVFGLKLAFS GVTLQVQNAS PLTLTIIAVC SVLLFLRVLF
AEQISSLRRG SEKPLIPQKT SDFLTQPKTQ RWGLAALIVL AFIWPFFGSR GAVDIATLIL
IYVMLGLGLN IVVGLAGLLD LGYVGFYAVG AYSYALLSHY YGLGFWICLP IAGMMAAVFG
FLLGFPVLRL RGDYLAIVTL GFGEIIRIFL RNLTELTGGP NGISNIDKPT FFGLTFERKA
AEGMQTFHEY FGLPYNSINK VVFLYLIALL LALAALFVIN RLLRMPIGRA WEALREDEIA
CRALGLNPTV IKLSAFTLGA AFAGFAGSFF AARQGLVTPE SFTFIESAII LAIVVLGGMG
SQLGVILAAI VMILLPELMR EFSDYRMLMF GALMVLMMIW RPQGFLPMQR PEMKLKAELP
K
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