| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4105 |
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| Symbol | |
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| ID | 1185785 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4626944 |
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| End bp | 4628383 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395451 |
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| Product | major facilitator family transporter |
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| Protein accession | NP_793866 |
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| Protein GI | 28871247 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTGACC ATAGAAGGAC GAATGGCGCC ATGAACAAGC TCCCGCCGGA AAACGCGACT
CAAGCGGCCA ATGCCTGGCG TGTTCTGTTC CTGTTGTTTT TGGCCAATCT GTTCAACTTT
TTCGATCGCA CCATTCCGGC AATCATCGTT GAGCCTATTC GTCTGGAATG GCACTTGAGC
GATTTTCAAC TGGGCATGCT CGGCACTGCG TTCACACTGG TCTACGCCAT CGCCGGCCTG
CCGCTGGGGC GCATGGCGGA TAACGGGTCG CGCAAAAAAC TGATGGGCTG CGGGCTGGCG
GTCTGGAGCG GCTTGACGGC GGTCAATGGC ATGGTCGGCA GTTTCTGGGC GTTCCTGCTG
GTACGCATGG GCGTCGGGAT AGGCGAGGCC AGTTATGCGC CTGCGGCCAA CTCGCTGATC
GGCGACCTGT TTCCTGCCCA CCGGCGTGCA CGTGCAATGG GCCTGTTCAT GCTCGGTCTG
CCATTGGGCT TGCTGTTGGC GTTCTTTACC ATTGGTGCGA TGGTCAAGGC GTTCGACAGC
TGGCGTGCGC CATTTTTCAT TGCGGCGGTG CCCGGTCTGT TGCTGGCGGT GTTGATCTTT
TTCATCAGGG AGCCCAAGCG CGGCGCTGCC GAAAACGTGC GTATGTCGCA AGCGAAGATC
GACAAGCCGA TCCGCCGCGT GCTGTCGATC CCGACCTTTC GCTGGCTGGT GCTGGGCGGT
CTGACCTTTA ATTTTGCGAC CTACGCCTGC AATTCATTCA TGGTGCCGAT GTTGCAGCGC
TACTTCCTTC TGCCGTTGCA GGAAGCGGCG GTGGCGACAG GGATCATCGT GGGCGTTACC
GGTTTGATCG GCCTGACGCT GGGCGGCTGG ATTGCCGACA AGCTGCACCA GCGCTCCGCC
AATGGCCGGC TGCTGTTTGC GACTTTCAGC ATGCTGGTCG CCGCGCTGGC GACAGGCTAT
GCGTTGCATG CTGGACGAAT CGAGATCGGT GTATTTGTCG GCGTTTTCAG CCTTGGCTGG
CTGTTTGCCT ACAACTTTTA CACCTGCGTC TACACCGCGA TTCAGGACGT GGTCGAGCCA
CGCCTGCGGG CAACCGCCAT GGCGTTGTTC TTTGCCGGGC TCTATCTGCT CGGTGGCGGG
CTTGGGCCGG TGGTGGTCGG TCTGCTGTCT GATCACTTCG CCCACTCGGC GATGGGCGTG
GCGGGTGTCG AGGTCATGAA CGAAAGCTTC AAGGCCATCG GCCTGCACGA CGCCATGTAC
CTGATCCCGG TCGCGCTGTT TCTGACCCTG CTGTTTCTGT ATCAGGCATC GCGCTGCTTC
AGCCGGGATG CCGAACGGAT GACGGCGCGC ATGGTGGCGG AAGAACCAGT GGCGGGGTTG
GCGGAAGGGG TTGCCTACTT TGGCCCCATC AAAGTAGGTC GCCGAGGGGC GAAAAGGTGA
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| Protein sequence | MTDHRRTNGA MNKLPPENAT QAANAWRVLF LLFLANLFNF FDRTIPAIIV EPIRLEWHLS
DFQLGMLGTA FTLVYAIAGL PLGRMADNGS RKKLMGCGLA VWSGLTAVNG MVGSFWAFLL
VRMGVGIGEA SYAPAANSLI GDLFPAHRRA RAMGLFMLGL PLGLLLAFFT IGAMVKAFDS
WRAPFFIAAV PGLLLAVLIF FIREPKRGAA ENVRMSQAKI DKPIRRVLSI PTFRWLVLGG
LTFNFATYAC NSFMVPMLQR YFLLPLQEAA VATGIIVGVT GLIGLTLGGW IADKLHQRSA
NGRLLFATFS MLVAALATGY ALHAGRIEIG VFVGVFSLGW LFAYNFYTCV YTAIQDVVEP
RLRATAMALF FAGLYLLGGG LGPVVVGLLS DHFAHSAMGV AGVEVMNESF KAIGLHDAMY
LIPVALFLTL LFLYQASRCF SRDAERMTAR MVAEEPVAGL AEGVAYFGPI KVGRRGAKR
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