Gene PSPTO_4090 details

Gene Information

• Locus tag: PSPTO_4090
• Symbol: ppiA
• ID: 1185770
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4601797
• End bp: 4602360
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637395436
• Product: peptidyl-prolyl cis-trans isomerase A
• Protein accession: NP_793851
• Protein GI: 28871232
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0170013
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGAAAA AAATCGCTCT CGCCGCCTGC TCCGTGCTGT TTGCCGCCAA CCTGATGGCT 
GCTCAAGACA AGGCCACGCA TGTGGTACTC GATACCAGCT TCGGCCAGAT TGAAATCGAG 
CTCGCCGACA CCAAGGCGCC TGTCAGCACT CAGAACTTTC TGGGTTACGT AGACAGCGGC 
TTCTACAGCA ACACCATTTT TCACCGGGTG ATTCCGGGCT TCATGGTGCA AGGTGGCGGT 
TTCACCCAGC AACTGGTGCA GAAACCCACC AAGGACCCGA TCAAGAACGA AGCCCAGAAC 
GGTCTGCATA ACGTGCGCGG CACGATTGCC ATGGCCCGGA CTTCGGATGT GAACTCGGCC 
ACCAGCCAGT TCTTCATCAA CACCAATGAC AATGCCATGC TCGACAACGG CACCCGTGAC 
TTCGGCTACG CGGTGTTCGG CAAAGTCGTC AAGGGCATGG ACGTGGTCGA CAACATCGTC 
AACGCCCGAA CCGGCAATCA GAAAGGCATG CAAAACGTGC CAGTCGACCC GATCCTGATC 
AAGTCCGCCA AACGCGTCAA CTGA 

 

Protein sequence

MLKKIALAAC SVLFAANLMA AQDKATHVVL DTSFGQIEIE LADTKAPVST QNFLGYVDSG 
FYSNTIFHRV IPGFMVQGGG FTQQLVQKPT KDPIKNEAQN GLHNVRGTIA MARTSDVNSA 
TSQFFINTND NAMLDNGTRD FGYAVFGKVV KGMDVVDNIV NARTGNQKGM QNVPVDPILI 
KSAKRVN