| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4065 |
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| Symbol | |
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| ID | 1185745 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4572655 |
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| End bp | 4573413 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395412 |
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| Product | oxidoreductase, short-chain dehydrogenase/reductase family |
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| Protein accession | NP_793827 |
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| Protein GI | 28871208 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.372477 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGGCA CTGGCAATAC GATTCTGGTT ACCGGCGGCA CCTCAGGCAT CGGCCTTGGT
CTGGCCCTCA GGCTTCACAA GGCGGGCAAT AAAGTCATCA TCGCGGGTCG TCGCAAGGCC
CTGCTGGACA AGATCGTATC GGAACATCCA GGTATTGAAT CAGTAGTGCT CGACGTCACC
GATCCACACT CCATCCAGCA CAGCAGCGAA GCGCTTGCGA TCAGCCATCC GAATCTGAAC
GTTCTCATAA ACAACGCGGG CATCATGCAC TGGGAGGACC TGACCGATGC GAAGTACCTG
AGCACCGCCG AAAATATCGT GACCACCAAC CTGCTTGGCA CGATTCGCAT GGTGTATGCA
TTTACTCCGA ATCTGCTCAA ACAGCCCAGC GCGACAATCG TTAATGTCAG CTCGGCGTTG
GCATTCGTTC CGTTGCCTGC GACACCGACC TACAGCGCAA CCAAAGCGGC CGTTCACTCA
TTTACTCAAA GCCTTCGGGT GCAACTGGCG GACTCGCCGG TCGAGGTTAT CGAGCTTGCA
CCGCCGGGCG TGCGTACCAC ATTGCTTGGC CAGGAAAATG ACGAGCACGC AATGCCGCTG
GAAGCGTTTC TGGATGAGAT CTTCAAACTG CTCGATATCT CCCCAACCCC ACAAGAACTT
GTCGTGGAGC GCGCCAAGCC TTTGCGATTT GCTGAAGCAA ACGGTTCACA TGGCGAGGTG
TTGAAGATGC TTGCGGGATA CAAACCGCCG GCAGAATGA
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| Protein sequence | MNGTGNTILV TGGTSGIGLG LALRLHKAGN KVIIAGRRKA LLDKIVSEHP GIESVVLDVT
DPHSIQHSSE ALAISHPNLN VLINNAGIMH WEDLTDAKYL STAENIVTTN LLGTIRMVYA
FTPNLLKQPS ATIVNVSSAL AFVPLPATPT YSATKAAVHS FTQSLRVQLA DSPVEVIELA
PPGVRTTLLG QENDEHAMPL EAFLDEIFKL LDISPTPQEL VVERAKPLRF AEANGSHGEV
LKMLAGYKPP AE
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