| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4057 |
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| Symbol | |
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| ID | 1185737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4562518 |
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| End bp | 4563495 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637395404 |
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| Product | site-specific recombinase, phage integrase family |
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| Protein accession | NP_793819 |
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| Protein GI | 28871200 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.251442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGCCGA GAAAGAAGGA CAGGCACCTG CCGCCGTGCA TGTACCTCAA GCACGGCGCG
TATTACCTGG TACGGAAGGG GAAGTGGGAA CGGCTCGGCA GCGACTTTCA GGAGGCGCTG
CTGGCTTACG CGAAGATAGT TGGCGGGAAA AGCAACGGCG GGATGTCTTT GCTTATCGAT
GAAGCGCTGG ACGCGATGCG TCGAAGGCTC TCAGAAAATA CAATCAAACA GTACGAAGCG
GCTTCGGTGA GGCTCAAGAC GTATCTTGAA GAGTTCGAGC CCCGCCAGGT TCTGCCGCGC
CATGTGGCAG CGCTTAAGCT ACACATGGCC GACACGCCGA ACATGGCCAA CCGCGTCATA
TCGTTTCTGA GAATGGTCTT TGCCTATGCC CTCGAAAGGC AGATCGTCGA TTCCAATCCT
TGCACCGGCA TACGCCGGCA CGCGGAAAAG AAGCGAGACC GATACATCAG CGATGCGGAG
TTCGCCGCAA TCTGTGCGGC CTCATCGGAG TACATGAGCG TGATTTGGGA AATGTGCTTC
CTGACAGGGC AGCGCATCAG TGACGTGCTC AACATCAAGC TGTCCGATAT TTCTGATGTT
GGCATAGCCT TTGAACAACA GAAGACCGGA GCTAAGCTGA TAGTCGCCAT GAGCCCAGAC
CTAAAAGCCC TTCTGGATCG GGTGCATGCT CTGCCTCGAA AGGTCAGAGG GGCAACGCTA
TTCTGTGCCC GATCCGGTGG TAAGCCGGTC TCCTACGACA CATGCAAGAT GGGATTCCGA
GCTGCTTGTA AAGCGGCAGG TGTCAAAGGT GCAACCATCC ACGACCTGCG CGCGAAGTCT
CTCACCGACA CTGATCGGCA AGGCAACAAC GCTCAGATGC TGGGTGGCCA CACCGACGCC
AAGATGACAA AACGCTATCT GCGCTTGAGG GAAATCGATA TAGCCCAGCC TCCCACAATG
CCTAAAAAAA GCCTGTAG
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| Protein sequence | MRPRKKDRHL PPCMYLKHGA YYLVRKGKWE RLGSDFQEAL LAYAKIVGGK SNGGMSLLID
EALDAMRRRL SENTIKQYEA ASVRLKTYLE EFEPRQVLPR HVAALKLHMA DTPNMANRVI
SFLRMVFAYA LERQIVDSNP CTGIRRHAEK KRDRYISDAE FAAICAASSE YMSVIWEMCF
LTGQRISDVL NIKLSDISDV GIAFEQQKTG AKLIVAMSPD LKALLDRVHA LPRKVRGATL
FCARSGGKPV SYDTCKMGFR AACKAAGVKG ATIHDLRAKS LTDTDRQGNN AQMLGGHTDA
KMTKRYLRLR EIDIAQPPTM PKKSL
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