| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4027 |
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| Symbol | |
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| ID | 1185706 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4536695 |
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| End bp | 4537342 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395374 |
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| Product | DNA-binding response regulator, LuxR family |
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| Protein accession | NP_793789 |
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| Protein GI | 28871170 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTACG ACATCCTGAT CGCTGATGAT CATCCCCTGT TTCGCAGCGC GCTGCGTCAG
GCGTTGACCA TCGGTCTTGG GCCTGAAGCG CGACTGGTCG AGGCTGAAAG CATTGCCCAG
CTGGAATCGC GTCTGGGCGA GAAAGCCGAT TGGGATCTGG TTCTGCTGGA CCTGAACATG
CCGGGGGCGT ATGGCTTCTC CGGGCTGGTC CTGCTGCGCG GTCAGTACCC GCAAATACCG
GTGGTGATGG TTTCGGCTCA GGAAGAAGCG TCGATTGTGG TGCGTTCCAG GGAGTTCGGT
GCCAGCGGGT TCATTCCCAA GTCCAGCTCG CTGGAAGTCA TTCAGCAGGC GGTGCGCACC
GTGCTCGATG GCGATGTCTG GTGGCCACCG CAGGTCAACG AATTCGTCAG TGTGTCAGAT
GAGGCCAAAG CTGCCAGTGC GGGCCTTGCC AGCCTGACAC CGCAGCAGTT TCGCGTACTG
ACCATGGTCT GCGAGGGCTT GCTGAACAAG CAGATTGCTT CCGAACTCAG TGTGTCCGAG
GCCACTATCA AGGCGCACGT CACCGCTATT TTCCGCAAGC TGGGCGTACG CACACGAACC
CAGGCAGCCC TGTTGTTGCA ACAGCTTGAA TCCATTTCGT CCAGCTAA
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| Protein sequence | MTYDILIADD HPLFRSALRQ ALTIGLGPEA RLVEAESIAQ LESRLGEKAD WDLVLLDLNM
PGAYGFSGLV LLRGQYPQIP VVMVSAQEEA SIVVRSREFG ASGFIPKSSS LEVIQQAVRT
VLDGDVWWPP QVNEFVSVSD EAKAASAGLA SLTPQQFRVL TMVCEGLLNK QIASELSVSE
ATIKAHVTAI FRKLGVRTRT QAALLLQQLE SISSS
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