| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4025 |
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| Symbol | |
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| ID | 1185704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4535318 |
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| End bp | 4536244 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395372 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_793787 |
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| Protein GI | 28871168 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.854112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATTTA CTCTCCGCCA GCTTCAAGTG TTCGTCGCCG TAGCGCGACA GGAAAGCGTC
TCCAAAGCGG CGGTGCTGCT TTCGCTGTCG CAGTCGGCTG CCAGCACCTC CATCACCGAA
CTGGAGCGCC AGTCGAGCTG CCAGCTATTT GATCGTGCCG GTAAACGGCT GAGCCTCAAC
GCCACCGGCA GGCAACTGTT GCCTCAGGCC GTTGCGCTGC TGGATCAGGC CAAGGAAATC
GAAGACCTGC TCAATGGCAA ATCAGGCTTT GGCTCGCTGG CCGTGGGGGC CACGCTGACC
ATCGGCAACT ACCTGGCGAC CCTGCTCATC GGCGGCTACA TGCAGCGTCA CCCGGAAAGC
CAGGTCAAGC TGCACGTCCA GAACACAGCG CATATCGTCC AGCAGGTTGC TCACTACGAG
ATTGACCTGG GCCTGATCGA AGGCGATTGC AGTCACCCGG ACATCGAAGT GCAATCCTGG
GTCGAGGATG AGCTTGTGGT GTTTTGTGCG CCCCAGCATC CGCTGGCCAA GCGCGCGCAG
GTGACACTGG AAGAACTGAC CCGCGAGGCC TGGATCCTGC GAGAACAAGG CTCCGGCACG
CGCCTGACGT TCGATCAGGC CATGCGTCAT CATCGCAACG GCCTGAATGT GCGGCTGGAG
CTGGAGCACA CCGAAGCCAT CAAGCGAGCG GTCGAGTCGG GACTGGGCAT TGGCTGCATT
TCCAGACTGG CGCTGCGCGA TGCGTTTCGT CGCGGCAATC TGGTCGAACT GGCCACGCCT
GAGCTGGATC TGTCGCGTCA GTTCTATTTC ATCTGGCACA AGCAGAAATA CCAGACCTCT
GCCATGCGCG AGTTTCTTGA ACTGTGCCGC GCCTTTACCG CTGGCGTACA GCGCAGCGAC
GAGATCGTAT TGCCGAGCCT GTACTGA
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| Protein sequence | MRFTLRQLQV FVAVARQESV SKAAVLLSLS QSAASTSITE LERQSSCQLF DRAGKRLSLN
ATGRQLLPQA VALLDQAKEI EDLLNGKSGF GSLAVGATLT IGNYLATLLI GGYMQRHPES
QVKLHVQNTA HIVQQVAHYE IDLGLIEGDC SHPDIEVQSW VEDELVVFCA PQHPLAKRAQ
VTLEELTREA WILREQGSGT RLTFDQAMRH HRNGLNVRLE LEHTEAIKRA VESGLGIGCI
SRLALRDAFR RGNLVELATP ELDLSRQFYF IWHKQKYQTS AMREFLELCR AFTAGVQRSD
EIVLPSLY
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