| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4019 |
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| Symbol | |
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| ID | 1185698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4530408 |
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| End bp | 4531739 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395366 |
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| Product | conserved hypothetical protein TIGR01125 |
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| Protein accession | NP_793781 |
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| Protein GI | 28871162 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAA AAGCCCCACG TGTAGGAATG ATATCGTTAG GGTGCCCCAA GGCGCTCGTT
GACTCCGAAC GCATCCTGAC CCAACTGCGC ATGGAAGGTT ACGAAGTCGT TGCGACCTAC
GAGGACGCCG ACGTGGTTGT GGTCAATACC TGCGGCTTCA TCGACACGGC CAAGGCCGAG
TCGCTGGAAG TGATCGGCGA AGCGATCAAG GAAAACGGCA AGGTCATCGT CACCGGCTGC
ATGGGCGTCG ATGCGAGCGT GATTCGCGCC GTACACCCGA GTGTGCTGTC GGTGACCGGC
CCGCAGCAGT ACGAGCAGGT GGTCAATGCC GTGCACGATG TCGTGCCGCC CCGCAAGGAT
CACAACCCGC TGATCGACCT GGTGCCGCCG CAAGGCGTCA AGCTGACCCC GCGCCATTAC
GCGTACCTGA AGATTTCCGA AGGCTGCAAC CACAGTTGCA GCTTCTGCAT CATCCCGTCG
ATGCGCGGCA AGCTGGTGAG CCGTCCGGTT GGCGATGTGC TGGATGAGGC CAAGCGTCTG
GTCAAATCCG GCGTGAAGGA ATTGCTGGTG ATTTCCCAGG ACACCAGCGC CTACGGCGTC
GATGTCAAAT ACCGCACCGG TTTCTGGGAC GGTCAGCCGG TCAAGACCCG CATGACCGAG
CTGTGTCAGG CTCTGGGCTC GATGGGGGTC TGGGTTCGTT TGCACTATGT CTACCCGTAC
CCGCACGTCG ATGAGCTGAT CCCGCTGATG GCGGCAGGCA AGATTCTGCC GTACCTGGAC
ATCCCCTTCC AGCACGCCAG CCCGAAAATC CTCAAGCTGA TGAAGCGCCC GGCCTTTGAA
GACAAGACTC TGGCGCGTAT CAAGAACTGG CGCGAGCAGT GCCCTGATCT GATCATCCGT
TCGACGTTCA TCGTCGGCTT CCCTGGTGAA ACCGAAGAGG ACTTCCAGTA CCTGCTGGAC
TGGCTGACCG AAGCCCAGCT GGACCGCGTT GGCTGCTTCC AGTACTCGCC GGTAGAAGGT
GCTCCTGCCA ACCTGCTGGA CGCCGCCATT GTGCCGGATG ACGTCAAGCA GGATCGCTGG
GATCGCTTCA TGGCTCATCA GCAGGCCATC AGCGCCGCCC GCCTGCAGAT GAAGATCGGC
AAGGAAATCG AAGTGCTGAT CGACGAAGTC GATGATCGCG GCGCGGTAGG CCGTTGTTTC
TTCGACGCGC CGGAAATCGA TGGCAACGTG TTTATCGGCC TTGAAGACGG TAGCACCGTC
CAGCCGGGCG ACAAGATCAT GTGTCGCGTC ACCGACGCCG ACGAATATGA CCTGTGGGCC
GAGATGCTCT GA
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| Protein sequence | MTAKAPRVGM ISLGCPKALV DSERILTQLR MEGYEVVATY EDADVVVVNT CGFIDTAKAE
SLEVIGEAIK ENGKVIVTGC MGVDASVIRA VHPSVLSVTG PQQYEQVVNA VHDVVPPRKD
HNPLIDLVPP QGVKLTPRHY AYLKISEGCN HSCSFCIIPS MRGKLVSRPV GDVLDEAKRL
VKSGVKELLV ISQDTSAYGV DVKYRTGFWD GQPVKTRMTE LCQALGSMGV WVRLHYVYPY
PHVDELIPLM AAGKILPYLD IPFQHASPKI LKLMKRPAFE DKTLARIKNW REQCPDLIIR
STFIVGFPGE TEEDFQYLLD WLTEAQLDRV GCFQYSPVEG APANLLDAAI VPDDVKQDRW
DRFMAHQQAI SAARLQMKIG KEIEVLIDEV DDRGAVGRCF FDAPEIDGNV FIGLEDGSTV
QPGDKIMCRV TDADEYDLWA EML
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