| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3975 |
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| Symbol | tolQ-2 |
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| ID | 1185651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4482308 |
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| End bp | 4483003 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637395322 |
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| Product | tolQ protein |
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| Protein accession | NP_793739 |
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| Protein GI | 28871120 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0234616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGAAGCTA ACGTCGTCGA CCATTCCTCC ATGTGGAGTT TGGTCAGCAA TGCCAGCATT
GTTGTTCAGT TGGTCATGCT GATTCTGGTG GCCGCTTCGG TCACCTCGTG GATCGTGATT
TTTCAGCGCA GCAACATGCT GCGTGCAGGT CGGCGTGCAC TGGACAGCTT CGAAGAGCGT
TTCTGGTCGG GTATCGACCT GTCCAAGCTG TACCGTCAGG CAGGTAGCAA TCCTGATCCT
GATTCGGGCG TCGAGCAGAT TTTCCGTGCC GGTTTCAAGG AATTCTCCCG CCTGCGTCAG
CAGTCCGGCG TTGATCCTGA TGCGGTCATG GAAGGTGTGG CGCGTGCCAT GCGTGTAGCC
ATTTCCCGCG AGGAAGAAAA GCTCGAAGCA GGCCTGCCGT ACCTGGCAAC CGTAGGTTCT
ACCAGCCCTT ATGTCGGTCT GTTCGGTACG GTCTGGGGGA TCATGAACTC CTTCCGCGGC
CTGGCAACTG CCCAGCAGGC AACATTGGCC ACCGTGGCGC CAGGTATTGC CGAAGCACTG
ATTGCAACGG CCATCGGCCT GTTCGCAGCC ATCCCGGCCG TTATTGCCTA CAACCGTTTC
GCCGCGCGCA GTGAGACCTT GATCAGCCGT TACTACACGT TCGCTGACGA GTTCCAGGCC
ATCCTGCACC GTAAAGTGCA CACCAGCGAA GAGTGA
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| Protein sequence | MEANVVDHSS MWSLVSNASI VVQLVMLILV AASVTSWIVI FQRSNMLRAG RRALDSFEER
FWSGIDLSKL YRQAGSNPDP DSGVEQIFRA GFKEFSRLRQ QSGVDPDAVM EGVARAMRVA
ISREEEKLEA GLPYLATVGS TSPYVGLFGT VWGIMNSFRG LATAQQATLA TVAPGIAEAL
IATAIGLFAA IPAVIAYNRF AARSETLISR YYTFADEFQA ILHRKVHTSE E
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