| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3970 |
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| Symbol | |
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| ID | 1185646 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4478083 |
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| End bp | 4478901 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637395317 |
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| Product | hypothetical protein |
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| Protein accession | NP_793734 |
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| Protein GI | 28871115 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.178755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAACGT GCCGACGTGC TCTAACCGTT TTGGCCCTCG CCCTTCCGCT TTCAGCGTTG
GGTGCGGCAC CTGTGGTCGA TAACAATTCT GGCTCTGGCA GCAGCAGTTA TCCGCCAGCG
GGTTATGGCA CGTCCGGCGC CTATGCCGGG GGAGGGGTTA CGGCCCCTGC CTCGGCACAA
GGTCAGCTGT TCATGCAATT GCAGCAAATG CAGGACGAAA TCGCGCGTTT GCGCGGTGTT
GTCGAGGTCC AGCAAAACGA CATCCAGCGC ATGAAGCAAG AAGCTCTGGA GCGTTATCAG
GAACTCGATC AACGCATAGC CAGTGGCGCA TCCGCTCCGG CTACCAATAA TTCTCAACCT
TCTGGTGGCG CTATCGACGC CAGTGGGACG CCTTCGGCCT CAGCGGCTCA GCAGGCACCG
GCAGCAGGCA CCGAGCCTCC TGATCCGGCG AAGGAAAAGC TGTATTACGA AGCGGCCTTC
GATTTGATCA AGGCAAAGGA TTTCGACAAG GCCAGTCAGG CCTTCACCGC TTTCCTGCGC
AAATACCCCA ACAGTTCATA CGCGGGCAAT GCCCAGTATT GGCTGGGCGA AGTGAATCTG
GCCAAAGGCG ACCTTCAGGG TGCCGGTCAG GCGTTCGCCA AAGTCAGCCA GCAGTACCCC
AAGCATGCCA AGGTGCCTGA CTCGCTGTAC AAGCTGGCTG ATGTCGAGCG TCGTCTGGGT
CATACCGACA AGGTCAAAGG CATATTGCAG CAGGTTGTCG CCCAGTATCC GGGCACTTCA
GCTGCACAGT TGGCGCAACG AGATCTCCAG CGCCTCTGA
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| Protein sequence | MRTCRRALTV LALALPLSAL GAAPVVDNNS GSGSSSYPPA GYGTSGAYAG GGVTAPASAQ
GQLFMQLQQM QDEIARLRGV VEVQQNDIQR MKQEALERYQ ELDQRIASGA SAPATNNSQP
SGGAIDASGT PSASAAQQAP AAGTEPPDPA KEKLYYEAAF DLIKAKDFDK ASQAFTAFLR
KYPNSSYAGN AQYWLGEVNL AKGDLQGAGQ AFAKVSQQYP KHAKVPDSLY KLADVERRLG
HTDKVKGILQ QVVAQYPGTS AAQLAQRDLQ RL
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